fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G28590 DNA-binding family protein (.1)

>AT5G28590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 293
SacI GAGCT|C 548
SpeI A|CTAGT 526


Click here to view TAIR data

>AT5G28590.1 length:651
ATGGCTCCAA TGTATTATAA ACGGCTTAAC CGCCTAAAAT CGCCTACGAT 
50
CCGATTCAGC GTCGCGCTTT CGAAAACTGG GCAATGTTTT ACTCCACACA 
100
TTGTTAATAT AACTCCTGGT GAGGATGTGG CGGAGAAGAT TGTTCTTTTC 
150
ACTCAGCAAA GCAAGCATCA GTTATGTGTT CTTTCTGCAT CTGGCTCCAT 
200
CTCTAATGCA TCCTTGTCTC ACCTTGCATC AGGAACCAGT CACGGGGGTA 
250
AAACTGGTGG CCTTAGCGTT TGTTTATCTA ATTCAGATGG TCAGATCTTT 
300
GGTGGAGGAG TTGGGGGACT CCTAAAGGCT GCTGGTCCAG TCCAGGTGGT 
350
TCTTGGCACG TTTCAGCTAG AGAAAAAGAA GGATGGAAGA AATGGTGCGA 
400
AAGGAGATGA TGCTTCGGGA AGTAGAAACA TGTTACCTTC TCCTTCTGGT 
450
ACAGAATCTT TGTTGGGCTA CCATCCCGAT ATGGAATCTT CCGGAAGAAA 
500
TCCAAACGAT GAGCATCATA CTATTACTAG TAGTGCATTG GGTGGTGGAG 
550
CTCATTTCAT GATGAAACCA CCTCAGGGCA TGCACATGAC ACATGCCCGA 
600
CCTTCTGAAT GGGGCGGTAC TGGGTATGAT TTGTCAGGTA AAAGTAGCTA 
650
A
700

>AT5G28590.1 longest ORF length:216
MAPMYYKRLN RLKSPTIRFS VALSKTGQCF TPHIVNITPG EDVAEKIVLF 
50
TQQSKHQLCV LSASGSISNA SLSHLASGTS HGGKTGGLSV CLSNSDGQIF 
100
GGGVGGLLKA AGPVQVVLGT FQLEKKKDGR NGAKGDDASG SRNMLPSPSG 
150
TESLLGYHPD MESSGRNPND EHHTITSSAL GGGAHFMMKP PQGMHMTHAR 
200
PSEWGGTGYD LSGKSS
250