Locus |
Common name |
Short description |
AT5G35550 |
ATTT2, TT2, AtMYB123 |
TRANSPARENT TESTA 2, MYB DOMAIN PROTEIN 123, Duplicated homeodomain-like superfamily protein (.1) |
>AT5G35550.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
578 |
BglII
| A|GATCT |
555 |
EcoRI
| G|AATTC |
562 |
SpeI
| A|CTAGT |
19, 496 |
Click here to view TAIR data
>AT5G35550.1 length:777
ATGGGAAAGA GAGCAACTAC TAGTGTGAGG AGAGAAGAGT TAAACAGAGG | 50 |
AGCTTGGACT GATCATGAAG ACAAGATCCT TAGAGATTAC ATCACCACTC | 100 |
ACGGCGAAGG CAAATGGAGC ACTCTCCCTA ACCAAGCTGG TCTCAAGAGG | 150 |
TGTGGCAAAA GCTGTAGACT TCGGTGGAAG AACTACCTAA GACCGGGGAT | 200 |
AAAGCGCGGT AACATCTCAT CTGATGAAGA AGAACTCATA ATCCGTCTCC | 250 |
ATAATCTTCT TGGAAACAGA TGGTCGTTGA TAGCTGGGAG GCTTCCAGGC | 300 |
CGAACAGACA ATGAAATAAA GAATCATTGG AACTCAAACC TCCGCAAAAG | 350 |
ACTTCCCAAA ACTCAAACCA AGCAACCAAA ACGTATAAAA CATTCGACGA | 400 |
ACAACGAGAA TAATGTATGT GTTATACGTA CAAAGGCGAT TAGGTGCTCA | 450 |
AAGACTCTTC TCTTCTCGGA TCTCTCTCTT CAGAAGAAGA GTAGTACTAG | 500 |
TCCACTACCT CTGAAAGAAC AAGAGATGGA TCAAGGTGGA TCTTCGTTGA | 550 |
TGGGAGATCT CGAATTCGAT TTCGATAGGA TCCATTCGGA GTTTCACTTC | 600 |
CCGGATTTGA TGGATTTTGA TGGTTTGGAC TGTGGAAACG TTACATCTCT | 650 |
TGTTTCATCT AACGAGATTT TGGGAGAGTT GGTTCCTGCT CAAGGTAATC | 700 |
TCGATCTCAA TAGACCTTTC ACTTCTTGTC ATCATCGTGG CGACGATGAA | 750 |
GATTGGCTCC GAGACTTCAC TTGTTGA | 800 |
>AT5G35550.1 longest ORF length:258
MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR | 50 |
CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG | 100 |
RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS | 150 |
KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF | 200 |
PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE | 250 |
DWLRDFTC | 300 |
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