|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G37020 | ARF8, ATARF8 | auxin response factor 8 (.1.2) |
>AT5G37020.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, KpnI, NdeI, NotI, PacI, SacI, SalI, SmaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 57, 668, 2031 |
| HindIII | A|AGCTT | 1994 |
| HpaI | GTT|AAC | 1794 |
| NcoI | C|CATGG | 1123, 1255, 2311 |
| NheI | G|CTAGC | 808 |
| PstI | CTGCA|G | 475, 1025 |
| PvuII | CAG|CTG | 1381, 1556 |
| SpeI | A|CTAGT | 609 |
| StyI | C|C[AT][AT]GG | 802, 1042, 1123, 1255, 2298, 2311 |
| XbaI | T|CTAGA | 960, 1884 |
Click here to view TAIR data
>AT5G37020.2 length:2322
ATGAAGCTGT CAACATCTGG ATTGGGTCAA CAGGGTCATG AAGGAGAGAA | 50 |
GTGTCTGAAT TCTGAGCTAT GGCATGCTTG TGCTGGACCA TTAGTCTCTC | 100 |
TTCCATCATC TGGTAGTCGA GTTGTTTACT TTCCACAGGG TCACAGTGAA | 150 |
CAGGTAGCTG CTACAACTAA TAAGGAAGTT GATGGTCACA TACCCAATTA | 200 |
CCCAAGCCTA CCACCACAAT TGATATGCCA GCTCCATAAT GTTACAATGC | 250 |
ATGCAGATGT TGAGACGGAT GAAGTCTATG CTCAAATGAC ACTTCAACCA | 300 |
TTGACACCGG AGGAGCAGAA GGAAACATTT GTACCGATTG AGTTGGGGAT | 350 |
ACCGAGTAAG CAACCTAGTA ATTATTTTTG TAAGACTCTC ACAGCTAGTG | 400 |
ATACCAGTAC ACATGGAGGG TTTTCTGTTC CTAGACGTGC TGCTGAGAAA | 450 |
GTGTTTCCTC CATTGGATTA CACACTGCAG CCACCAGCTC AAGAACTGAT | 500 |
TGCAAGGGAT CTCCATGATG TTGAATGGAA GTTTAGGCAT ATCTTTCGGG | 550 |
GACAGCCCAA ACGGCATCTC CTAACTACTG GATGGAGTGT CTTTGTCAGT | 600 |
GCCAAGCGAC TAGTAGCTGG AGATTCTGTC ATTTTCATCA GGAATGAAAA | 650 |
GAATCAACTC TTTTTGGGAA TTCGTCATGC CACTCGGCCG CAGACTATTG | 700 |
TACCATCATC TGTTTTATCT AGTGATAGCA TGCATATTGG ACTCCTTGCT | 750 |
GCTGCTGCAC ATGCTTCTGC AACTAATAGC TGTTTCACTG TTTTCTTTCA | 800 |
TCCAAGGGCT AGCCAATCTG AGTTTGTGAT ACAACTTTCC AAGTACATTA | 850 |
AAGCCGTTTT TCACACGCGT ATTTCAGTTG GGATGCGCTT TCGCATGCTC | 900 |
TTCGAGACAG AAGAGTCGAG TGTCCGCAGG TACATGGGTA CTATAACTGG | 950 |
TATTAGTGAT CTAGATTCTG TTCGTTGGCC AAACTCTCAT TGGCGATCTG | 1000 |
TGAAGGTTGG TTGGGATGAA TCGACTGCAG GGGAGAGACA GCCAAGGGTT | 1050 |
TCTTTATGGG AGATTGAGCC TCTGACTACC TTTCCTATGT ATCCATCTCT | 1100 |
TTTTCCTCTC AGACTAAAAC GTCCATGGCA TGCTGGCACA TCATCTTTGC | 1150 |
CTGATGGAAG GGGTGATTTG GGAAGTGGTC TAACATGGCT AAGAGGGGGA | 1200 |
GGTGGAGAGC AGCAAGGTTT GCTTCCTCTA AATTATCCAT CTGTTGGTTT | 1250 |
GTTTCCATGG ATGCAACAAA GGCTGGATCT CAGTCAAATG GGGACTGATA | 1300 |
ATAATCAGCA ATACCAAGCA ATGTTAGCTG CTGGGTTGCA GAACATCGGC | 1350 |
GGTGGAGATC CTTTAAGACA GCAGTTTGTA CAGCTGCAAG AGCCTCACCA | 1400 |
CCAATATCTT CAACAATCAG CTTCCCATAA TTCTGATTTG ATGCTTCAGC | 1450 |
AGCAACAGCA GCAACAAGCG TCACGCCATC TCATGCATGC TCAAACACAG | 1500 |
ATTATGAGTG AGAATCTTCC GCAGCAGAAT ATGCGACAAG AAGTTAGTAA | 1550 |
CCAACCAGCT GGACAGCAGC AACAGCTACA GCAACCGGAC CAAAATGCAT | 1600 |
ATCTTAATGC TTTCAAAATG CAAAATGGCC ATCTTCAACA GTGGCAGCAG | 1650 |
CAATCAGAGA TGCCATCTCC CTCGTTCATG AAGTCAGATT TTACTGACTC | 1700 |
AAGCAACAAA TTTGCAACAA CTGCTAGTCC GGCTTCTGGA GATGGCAATC | 1750 |
TTTTGAATTT TTCTATAACC GGTCAGTCTG TACTCCCTGA GCAGTTAACA | 1800 |
ACAGAGGGCT GGTCTCCAAA AGCATCCAAC ACTTTTTCTG AACCGTTGTC | 1850 |
ACTTCCACAA GCCTATCCTG GGAAGAGTCT TGCTCTAGAA CCCGGAAATC | 1900 |
CGCAGAATCC CTCTCTTTTC GGTGTTGATC CCGACTCTGG ACTCTTCCTC | 1950 |
CCCAGTACGG TTCCCCGCTT TGCTTCTTCA TCAGGAGATG CTGAAGCTTC | 2000 |
CCCTATGTCA CTAACAGATT CAGGATTTCA GAATTCCTTA TATAGCTGCA | 2050 |
TGCAAGACAC AACTCATGAG TTATTGCATG GAGCTGGACA GATTAACTCG | 2100 |
TCCAACCAAA CCAAGAACTT TGTAAAGGTT TATAAATCTG GTTCGGTTGG | 2150 |
GCGTTCATTA GACATCTCCC GATTCAGCAG CTACCACGAG CTGCGAGAAG | 2200 |
AGTTAGGGAA GATGTTTGCT ATCGAAGGGT TGTTGGAAGA CCCCCTTAGA | 2250 |
TCAGGCTGGC AGCTTGTATT CGTTGACAAG GAAAATGATA TTCTTCTCCT | 2300 |
TGGTGATGAC CCATGGGAGT AA | 2350 |
>AT5G37020.2 longest ORF length:773
MKLSTSGLGQ QGHEGEKCLN SELWHACAGP LVSLPSSGSR VVYFPQGHSE | 50 |
QVAATTNKEV DGHIPNYPSL PPQLICQLHN VTMHADVETD EVYAQMTLQP | 100 |
LTPEEQKETF VPIELGIPSK QPSNYFCKTL TASDTSTHGG FSVPRRAAEK | 150 |
VFPPLDYTLQ PPAQELIARD LHDVEWKFRH IFRGQPKRHL LTTGWSVFVS | 200 |
AKRLVAGDSV IFIRNEKNQL FLGIRHATRP QTIVPSSVLS SDSMHIGLLA | 250 |
AAAHASATNS CFTVFFHPRA SQSEFVIQLS KYIKAVFHTR ISVGMRFRML | 300 |
FETEESSVRR YMGTITGISD LDSVRWPNSH WRSVKVGWDE STAGERQPRV | 350 |
SLWEIEPLTT FPMYPSLFPL RLKRPWHAGT SSLPDGRGDL GSGLTWLRGG | 400 |
GGEQQGLLPL NYPSVGLFPW MQQRLDLSQM GTDNNQQYQA MLAAGLQNIG | 450 |
GGDPLRQQFV QLQEPHHQYL QQSASHNSDL MLQQQQQQQA SRHLMHAQTQ | 500 |
IMSENLPQQN MRQEVSNQPA GQQQQLQQPD QNAYLNAFKM QNGHLQQWQQ | 550 |
QSEMPSPSFM KSDFTDSSNK FATTASPASG DGNLLNFSIT GQSVLPEQLT | 600 |
TEGWSPKASN TFSEPLSLPQ AYPGKSLALE PGNPQNPSLF GVDPDSGLFL | 650 |
PSTVPRFASS SGDAEASPMS LTDSGFQNSL YSCMQDTTHE LLHGAGQINS | 700 |
SNQTKNFVKV YKSGSVGRSL DISRFSSYHE LREELGKMFA IEGLLEDPLR | 750 |
SGWQLVFVDK ENDILLLGDD PWE | 800 |