|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G37260 | RVE2, CIR1 | REVEILLE 2, CIRCADIAN 1, Homeodomain-like superfamily protein (.1) |
>AT5G37260.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 385 |
| HindIII | A|AGCTT | 337 |
| PstI | CTGCA|G | 206 |
| PvuII | CAG|CTG | 494 |
| StyI | C|C[AT][AT]GG | 298 |
| XbaI | T|CTAGA | 531 |
Click here to view TAIR data
>AT5G37260.1 length:864
ATGGCTATGC AGGAACGTTG TGAGAGTTTA TGTTCTGATG AACTTATATC | 50 |
TTCCTCAGAT GCCTTTTACC TCAAGACAAG AAAGCCTTAT ACCATCACTA | 100 |
AACAAAGAGA GAAATGGACA GAAGCAGAGC ATGAGAAGTT TGTAGAAGCA | 150 |
TTGAAACTCT ATGGCAGAGC TTGGAGACGA ATCGAAGAAC ATGTTGGAAC | 200 |
AAAAACTGCA GTTCAGATTC GAAGCCATGC GCAGAAGTTC TTTACTAAGG | 250 |
TTGCTCGCGA TTTTGGTGTT AGCTCTGAGT CCATTGAGAT CCCGCCTCCA | 300 |
AGGCCAAAGA GAAAGCCGAT GCATCCTTAC CCTAGAAAGC TTGTGATTCC | 350 |
TGATGCAAAA GAGATGGTAT ACGCTGAACT AACCGGATCC AAGCTGATTC | 400 |
AGGATGAAGA TAACCGATCT CCAACATCGG TTTTATCAGC TCATGGCTCA | 450 |
GATGGATTAG GTTCCATTGG TTCAAATTCA CCTAACTCTT CTTCAGCTGA | 500 |
GTTATCATCT CACACAGAGG AATCATTGTC TCTAGAAGCA GAGACCAAAC | 550 |
AGAGCCTTAA GCTCTTTGGA AAAACTTTTG TAGTTGGTGA TTACAACTCT | 600 |
TCAATGAGTT GTGATGATTC TGAAGATGGC AAGAAGAAGC TATACTCAGA | 650 |
AACACAGTCT CTTCAATGTT CTTCTTCTAC TTCAGAAAAC GCTGAAACAG | 700 |
AAGTGGTAGT GTCGGAGTTC AAAAGAAGTG AGAGATCAGC TTTCTCTCAG | 750 |
TTAAAATCGT CGGTGACTGA GATGAACAAC ATGAGAGGGT TCATGCCTTA | 800 |
CAAAAAGAGA GTAAAGGTGG AAGAAAACAT TGACAATGTA AAATTATCAT | 850 |
ATCCTTTGTG GTGA | 900 |
>AT5G37260.1 longest ORF length:287
MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA | 50 |
LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP | 100 |
RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS | 150 |
DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS | 200 |
SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ | 250 |
LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW | 300 |