fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G38800 ATBZIP43 basic leucine-zipper 43 (.1)

>AT5G38800.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 231
HindIII A|AGCTT 343
NcoI C|CATGG 30
PvuII CAG|CTG 331
StyI C|C[AT][AT]GG 30


Click here to view TAIR data

>AT5G38800.1 length:498
ATGCAACCAT CCACCAACAT TTTTAGCCTC CATGGTTGTC CACCTTCGTA 
50
CCTTTCCCAT ATTCCTACAT CCTCACCATT TTGCGGACAA AACCCTAATC 
100
CATTCTTCAG CTTCGAAACT GGCGTGAACA CTTCACAGTT CATGAGTTTG 
150
ATCAGCAGCA ACAACTCGAC CTCAGATGAA GCAGAAGAGA ATCATAAGGA 
200
GATAATAAAT GAGAGGAAGC AAAAGAGGAA GATATCTAAC AGAGAATCGG 
250
CAAGAAGATC GCGTATGAGG AAGCAGAGAC AAGTGGATGA GCTTTGGTCA 
300
CAGGTGATGT GGCTTAGGGA TGAGAATCAT CAGCTGCTTC GTAAGCTTAA 
350
CTGCGTTTTA GAGTCTCAAG AGAAGGTTAT TGAAGAGAAT GTTCAGCTCA 
400
AAGAGGAAAC CACTGAGCTT AAGCAAATGA TTAGTGATAT GCAGCTTCAG 
450
AATCAGAGTC CTTTCTCTTG CATCAGAGAC GACGACGACG TTGTATAG
500

>AT5G38800.1 longest ORF length:165
MQPSTNIFSL HGCPPSYLSH IPTSSPFCGQ NPNPFFSFET GVNTSQFMSL 
50
ISSNNSTSDE AEENHKEIIN ERKQKRKISN RESARRSRMR KQRQVDELWS 
100
QVMWLRDENH QLLRKLNCVL ESQEKVIEEN VQLKEETTEL KQMISDMQLQ 
150
NQSPFSCIRD DDDVV
200