Locus |
Common name |
Short description |
AT5G39610 |
ORE1, AtNAC2, ANAC092, ATNAC6 |
ORESARA 1, NAC domain containing protein 2, Arabidopsis NAC domain containing protein 92, NAC domain containing protein 6 (.1) |
>AT5G39610.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
720 |
BglII
| A|GATCT |
54 |
NcoI
| C|CATGG |
196 |
SacI
| GAGCT|C |
386 |
StyI
| C|C[AT][AT]GG |
184, 196 |
Click here to view TAIR data
>AT5G39610.1 length:858
ATGGATTACG AGGCATCAAG AATCGTCGAA ATGGTAGAAG ATGAAGAACA | 50 |
TATAGATCTA CCACCAGGAT TCAGATTTCA CCCTACTGAT GAAGAACTCA | 100 |
TAACTCACTA CCTCAAACCA AAGGTTTTCA ACACTTTCTT CTCTGCTACT | 150 |
GCCATTGGTG AAGTTGATCT CAACAAGATT GAGCCTTGGG ACTTACCATG | 200 |
GAAGGCTAAG ATGGGAGAAA AAGAATGGTA TTTCTTCTGT GTGAGAGACC | 250 |
GGAAATACCC GACCGGTTTA AGGACAAACC GGGCGACAGA AGCCGGTTAT | 300 |
TGGAAAGCCA CAGGAAAAGA CAAAGAGATA TTCAAGGGAA AATCACTTGT | 350 |
GGGTATGAAG AAAACTTTGG TTTTCTATAA AGGAAGAGCT CCTAAAGGAG | 400 |
TTAAAACCAA TTGGGTTATG CATGAATATC GTTTAGAAGG CAAATATTGT | 450 |
ATTGAAAATC TTCCCCAAAC AGCTAAGAAC GAATGGGTTA TATGTCGTGT | 500 |
TTTCCAAAAA CGTGCCGATG GTACAAAGGT TCCAATGTCA ATGCTTGATC | 550 |
CACACATTAA CCGAATGGAA CCAGCCGGTT TACCTTCGTT AATGGATTGT | 600 |
TCTCAACGAG ACTCCTTCAC CGGTTCGTCG TCTCACGTGA CCTGCTTCTC | 650 |
CGACCAAGAA ACCGAAGACA AAAGACTTGT CCACGAGTCC AAAGACGGTT | 700 |
TTGGTTCTCT GTTTTACTCG GATCCTCTGT TTTTACAAGA CAATTATTCG | 750 |
CTAATGAAGC TGTTGCTTGA CGGTCAAGAA ACTCAATTCT CCGGCAAACC | 800 |
TTTCGACGGT CGTGATTCGT CCGGTACAGA AGAATTGGAT TGCGTTTGGA | 850 |
ATTTCTGA | 900 |
>AT5G39610.1 longest ORF length:285
MDYEASRIVE MVEDEEHIDL PPGFRFHPTD EELITHYLKP KVFNTFFSAT | 50 |
AIGEVDLNKI EPWDLPWKAK MGEKEWYFFC VRDRKYPTGL RTNRATEAGY | 100 |
WKATGKDKEI FKGKSLVGMK KTLVFYKGRA PKGVKTNWVM HEYRLEGKYC | 150 |
IENLPQTAKN EWVICRVFQK RADGTKVPMS MLDPHINRME PAGLPSLMDC | 200 |
SQRDSFTGSS SHVTCFSDQE TEDKRLVHES KDGFGSLFYS DPLFLQDNYS | 250 |
LMKLLLDGQE TQFSGKPFDG RDSSGTEELD CVWNF | 300 |
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