fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G39610 ORE1, AtNAC2, ANAC092, ATNAC6 ORESARA 1, NAC domain containing protein 2, Arabidopsis NAC domain containing protein 92, NAC domain containing protein 6 (.1)

>AT5G39610.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 720
BglII A|GATCT 54
NcoI C|CATGG 196
SacI GAGCT|C 386
StyI C|C[AT][AT]GG 184, 196


Click here to view TAIR data

>AT5G39610.1 length:858
ATGGATTACG AGGCATCAAG AATCGTCGAA ATGGTAGAAG ATGAAGAACA 
50
TATAGATCTA CCACCAGGAT TCAGATTTCA CCCTACTGAT GAAGAACTCA 
100
TAACTCACTA CCTCAAACCA AAGGTTTTCA ACACTTTCTT CTCTGCTACT 
150
GCCATTGGTG AAGTTGATCT CAACAAGATT GAGCCTTGGG ACTTACCATG 
200
GAAGGCTAAG ATGGGAGAAA AAGAATGGTA TTTCTTCTGT GTGAGAGACC 
250
GGAAATACCC GACCGGTTTA AGGACAAACC GGGCGACAGA AGCCGGTTAT 
300
TGGAAAGCCA CAGGAAAAGA CAAAGAGATA TTCAAGGGAA AATCACTTGT 
350
GGGTATGAAG AAAACTTTGG TTTTCTATAA AGGAAGAGCT CCTAAAGGAG 
400
TTAAAACCAA TTGGGTTATG CATGAATATC GTTTAGAAGG CAAATATTGT 
450
ATTGAAAATC TTCCCCAAAC AGCTAAGAAC GAATGGGTTA TATGTCGTGT 
500
TTTCCAAAAA CGTGCCGATG GTACAAAGGT TCCAATGTCA ATGCTTGATC 
550
CACACATTAA CCGAATGGAA CCAGCCGGTT TACCTTCGTT AATGGATTGT 
600
TCTCAACGAG ACTCCTTCAC CGGTTCGTCG TCTCACGTGA CCTGCTTCTC 
650
CGACCAAGAA ACCGAAGACA AAAGACTTGT CCACGAGTCC AAAGACGGTT 
700
TTGGTTCTCT GTTTTACTCG GATCCTCTGT TTTTACAAGA CAATTATTCG 
750
CTAATGAAGC TGTTGCTTGA CGGTCAAGAA ACTCAATTCT CCGGCAAACC 
800
TTTCGACGGT CGTGATTCGT CCGGTACAGA AGAATTGGAT TGCGTTTGGA 
850
ATTTCTGA
900

>AT5G39610.1 longest ORF length:285
MDYEASRIVE MVEDEEHIDL PPGFRFHPTD EELITHYLKP KVFNTFFSAT 
50
AIGEVDLNKI EPWDLPWKAK MGEKEWYFFC VRDRKYPTGL RTNRATEAGY 
100
WKATGKDKEI FKGKSLVGMK KTLVFYKGRA PKGVKTNWVM HEYRLEGKYC 
150
IENLPQTAKN EWVICRVFQK RADGTKVPMS MLDPHINRME PAGLPSLMDC 
200
SQRDSFTGSS SHVTCFSDQE TEDKRLVHES KDGFGSLFYS DPLFLQDNYS 
250
LMKLLLDGQE TQFSGKPFDG RDSSGTEELD CVWNF
300