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| Locus | Common name | Short description |
| AT5G39660 | CDF2, AtDof5. 2 | cycling DOF factor 2 (.1.2) |
>AT5G39660.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Taqƒ¿I, TliI, TspRI, Tth111I, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 420 |
| AciI | C|CGC | 419, 1083 |
| AluI | AG|CT | 18, 48, 74, 334, 517, 577, 619, 823, 947, 980, 1180, 1246, 1364 |
| ApoI | Pu|AATTPy | 1029 |
| AvaI | C|PyCGPuG | 954, 1129 |
| AvaII | G|G[AT]CC | 867 |
| BanII | GPuGCPy|C | 1365 |
| BfaI | C|TAG | 72, 1040, 1341 |
| BsaAI | PyAC|GTPu | 1055 |
| BsaJI | C|CNNGG | 954, 967 |
| BsaWI | [AT]|CCGG[AT] | 82, 166, 543, 1311 |
| BsiHKAI | G[AT]GC[AT]|C | 1365 |
| BslI | CCNNNNN|NNGG | 51, 780, 935, 1041 |
| BsoBI | C|PyCGPuG | 954, 1129 |
| Bsp1286I | G[GAT]GC[CAT]|C | 1365 |
| BsrFI | Pu|CCGGPy | 133, 936 |
| BsrI | ACTGGN| | 944 |
| BssKI | |CCNGG | 864, 953, 966, 1077, 1299 |
| BstF5I | GGATGNN| | 993 |
| BstNI | CC|[AT]GG | 864, 1077 |
| BstUI | CG|CG | 420 |
| BstXI | CCANNNNN|NTGG | 880 |
| Cac8I | GCN|NGC | 370, 1320 |
| Cfr10I | [AG]|CCGG[TC] | 133, 936 |
| DdeI | C|TNAG | 46, 100, 1158 |
| DpnI | GA-CH3|TC | 5, 644, 1169, 1213, 1254 |
| DpnII | |GATC | 5, 644, 1169, 1213, 1254 |
| EcoNI | CCTNN|NNNAGG | 1041 |
| Fnu4HI | GC|NGC | 336, 949, 1068, 1182, 1332 |
| HaeIII | GG|CC | 882 |
| HincII | GTPy|PuAC | 472 |
| HinfI | G|ANTC | 35, 63, 104, 123, 162, 261, 276, 354, 407, 572, 690, 705, 725, 1101, 1325 |
| HpaI | GTT|AAC | 472 |
| HpaII | C|CGG | 8, 81, 132, 165, 542, 935, 953, 965, 1298, 1310 |
| Hpy188I | TCN|GA | 101, 120, 503, 687, 1243, 1252, 1284 |
| HpyCH4III | ACN|GT | 413, 592, 759, 795, 831, 920 |
| HpyCH4IV | A|CGT | 559, 1054 |
| HpyCH4V | TG|CA | 337, 491, 624, 664, 765, 1317 |
| MboI | |GATC | 5, 644, 1169, 1213, 1254 |
| MseI | T|TAA | 15, 89, 389, 471, 803 |
| MslI | CAPyNN|NNPuTG | 659, 991, 1055 |
| MspA1I | C[AC]G|C[GT]G | 518 |
| MspI | C|CGG | 8, 81, 132, 165, 542, 935, 953, 965, 1298, 1310 |
| MwoI | GCNNNNN|NNGC | 9, 490, 1329 |
| N.BstNBI | GAGTCNNNN|N | 266, 359, 577, 1106 |
| NciI | CC|[CG]GG | 953, 966, 1299 |
| NlaIII | CATG| | 433, 596, 855, 972, 987, 1358 |
| NlaIV | GGN|NCC | 798, 1018, 1081, 1146 |
| PmlI | CAC|GTG | 1055 |
| PsiI | TTA|TAA | 588 |
| PspGI | |CC[AT]GG | 864, 1077 |
| PvuII | CAG|CTG | 518 |
| RsaI | GT|AC | 129, 363 |
| SacI | GAGCT|C | 1365 |
| Sau3AI | |GATC | 5, 644, 1169, 1213, 1254 |
| Sau96I | G|GNCC | 867 |
| ScrFI | CC|NGG | 864, 953, 966, 1077, 1299 |
| SmaI | CCC|GGG | 954 |
| SmlI | C|TPyPuAG | 377 |
| TfiI | G|A[AT]TC | 35, 63, 104, 123, 162, 276, 407, 690, 705, 725, 1325 |
| TseI | G|C[AT]GC | 336, 949, 1068, 1182, 1332 |
| Tsp45I | |GT[CG]AC | 1057, 1103 |
| Tsp509I | |AATT | 1004, 1028 |
| XcmI | CCANNNNN|NNNNTGG | 880, 943 |
| XmaI | C|CCGGG | 954 |
| XmnI | GAANN|NNTTC | 982 |
Click here to view TAIR data
>AT5G39660.1 length:1374
ATGGCTGATC CGGCGATTAA GCTCTTTGGA AAGACGATTC CTTTACCTGA | 50 |
GCTTGGTGTT GTTGATTCTT CTTCTAGCTA TACCGGATTT TTAACCGAAA | 100 |
CTCAGATTCC TGTTCGGTTA TCAGATTCGT GTACCGGCGA TGATGATGAT | 150 |
GAAGAGATGG GTGATTCCGG TTTAGGACGA GAAGAAGGTG ATGATGTTGG | 200 |
TGATGGTGGA GGAGAGAGCG AGACTGATAA AAAGGAAGAA AAAGATAGTG | 250 |
AGTGTCAGGA AGAGTCATTG AGGAATGAAT CTAATGATGT TACTACTACT | 300 |
ACATCGGGTA TAACTGAAAA AACGGAAACA ACAAAAGCTG CAAAGACGAA | 350 |
TGAAGAGTCA GGTGGTACTG CTTGCTCTCA AGAGGGGAAG TTAAAGAAAC | 400 |
CTGATAAGAT TCTACCGTGT CCGCGATGTA ACAGCATGGA AACCAAGTTC | 450 |
TGTTACTACA ACAACTATAA TGTTAACCAA CCTCGCCATT TCTGCAAGAA | 500 |
ATGTCAGAGA TATTGGACAG CTGGTGGAAC GATGAGGAAT GTTCCGGTTG | 550 |
GTGCTGGGAG ACGTAAGAAT AAGAGTCCAG CTTCTCATTA TAACCGTCAT | 600 |
GTAAGTATAA CATCTGCGGA AGCTATGCAG AAGGTGGCGA GAACTGATCT | 650 |
TCAACATCCT AATGGTGCAA ATCTTCTCAC TTTTGGCTCT GATTCTGTGC | 700 |
TTTGTGAATC TATGGCTTCT GGATTGAATC TTGTTGAGAA GTCATTGTTG | 750 |
AAGACACAAA CTGTATTGCA AGAACCCAAT GAAGGCTTGA AGATTACGGT | 800 |
TCCGTTAAAC CAGACAAACG AAGAAGCTGG AACAGTCAGC CCGTTACCAA | 850 |
AAGTTCCATG CTTTCCAGGA CCACCACCAA CTTGGCCTTA CGCTTGGAAC | 900 |
GGAGTTTCGT GGACGATTTT ACCGTTTTAC CCTCCACCGG CTTACTGGAG | 950 |
CTGCCCGGGG GTTTCACCGG GGGCATGGAA CAGCTTCACA TGGATGCCAC | 1000 |
AACCCAATTC ACCATCTGGT TCCAATCCAA ATTCTCCTAC ACTAGGTAAA | 1050 |
CATTCACGTG ACGAGAACGC TGCTGAACCA GGAACCGCTT TTGATGAAAC | 1100 |
CGAGTCACTT GGTAGGGAGA AAAGCAAACC CGAGAGATGC TTGTGGGTTC | 1150 |
CCAAGACGCT GAGGATTGAT GATCCAGAGG AAGCTGCTAA AAGTTCCATC | 1200 |
TGGGAAACAT TAGGGATCAA AAAAGACGAA AATGCGGATA CTTTCGGAGC | 1250 |
TTTCAGATCA TCAACCAAAG AAAAAAGCAG TCTTTCTGAA GGAAGACTTC | 1300 |
CGGGAAGAAG ACCGGAGTTG CAAGCGAATC CTGCTGCTCT TTCTAGGTCA | 1350 |
GCAAACTTCC ATGAGAGCTC ATAG | 1400 |
>AT5G39660.1 longest ORF length:457
MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD | 50 |
EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT | 100 |
TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF | 150 |
CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH | 200 |
VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL | 250 |
KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN | 300 |
GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK | 350 |
HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI | 400 |
WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS | 450 |
ANFHESS | 500 |