fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G39700 ATMYB89 myb domain protein 89 (.1)

>AT5G39700.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 496
HindIII A|AGCTT 403
SacI GAGCT|C 362


Click here to view TAIR data

>AT5G39700.1 length:573
ATGTATCTGT TTATGTATAA ATGTAACATA GTTTTGGAGG AGACTCATGT 
50
TTTTCAAAAT ACCCCTTGTG ATGTTTCATT GCAGAGGCCA TTTAATGGGT 
100
TTGGAGAAAA CAATGCATTA CCATTGAGAA AGATGCATCA AGAGGAGAAG 
150
AAGAAGAAAC ATAGGGGTGG ACACTGGACA CTTTCAGAGG ATCTCAAACT 
200
CAAAGAGCTT GTGGCGGTTT TTGGTCCTCA GAACTGGAAA TTCATTGGAG 
250
AGAAGATGGA ACCAAGAACA AGTCTAAGTT GTAGACAAAG GTGGTTTAAC 
300
CAGCTCGATC CGAAGATTAA CAAAAGAAAT TTCACTGATG AGGAAGAAGA 
350
GAAGCTGCTT AGAGCTCACA TATTATATGG TAACAAATGG TCTAAGATCG 
400
CTAAGCTTTT CAATCGAAGA ACAGACCATG CTGTTAAGAA TCATTGGCAC 
450
AGTCTCATGA ATAGAATCAT TAGGAAGCAA TCAGCTTCTG ACATAAGATC 
500
TTTCGATAAC ATCCAGAATT ATCAAACCTC CAACTTTCTT CCTGGTTTGT 
550
GTCTCCTTAA TACTAAACAA TAG
600

>AT5G39700.1 longest ORF length:190
MYLFMYKCNI VLEETHVFQN TPCDVSLQRP FNGFGENNAL PLRKMHQEEK 
50
KKKHRGGHWT LSEDLKLKEL VAVFGPQNWK FIGEKMEPRT SLSCRQRWFN 
100
QLDPKINKRN FTDEEEEKLL RAHILYGNKW SKIAKLFNRR TDHAVKNHWH 
150
SLMNRIIRKQ SASDIRSFDN IQNYQTSNFL PGLCLLNTKQ 
200