fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G40430 ATMYB22 myb domain protein 22 (.1)

>AT5G40430.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 380
BglII A|GATCT 386
XbaI T|CTAGA 744


Click here to view TAIR data

>AT5G40430.1 length:771
ATGGGTGAAC CTCAATTATT TGATGTGCCA GTGCTAGAAG GTATCAAAAA 
50
TACAACCAAC GAAATCATGA ATCAACTTGA AGATGATAAG ATGAAAAAAA 
100
CTTATGAGAA TAAAAAGGAG GCGAGCACAA GCAAATATTT GAAGAAAAGT 
150
GACATCACCA AAAAAAGATG GACAGAATCT GAGGACATAA AATTGAAAGA 
200
GATGGTGGCA CTTGAACCCA AAAAATGGAC AAAGGTCGCA AAACATTTTG 
250
AAGGACGAAC ACCAAAACAA TGCAGAGAGA GGTGGCATAA CCATGCTCGT 
300
CCTAACGTTA AGAAAACTAC TTGGAGTGAA GAAGAAGATC AAATACTAAT 
350
TGAAGTACAC AAAGTAATTG GTGCCAAATG GATCCAGATC TCAGAGCAAC 
400
TTCCGGGGAG GAGCTATAAC AATGTTAAGA ACCATTGGAA TACCACAAAG 
450
CGTCGGGTGC AAAATAAAAG TGGTCGAACT GTCAACCGTG TCGGCAATAA 
500
CATCCTTGAA AACTACATAA GGAGTATCAC AATCAACAAC GATGATGAAT 
550
CTGATGGTGA ACCGACAAAC ATTGAGAATT ATCATGATGA CTCTGAAGAT 
600
ATGTTATATG GGGAGATGAA TTTGAGTCCA GAGGCTATAA CGCAGACCAC 
650
CAAACCATTG ACCGATGCTT CTACAATATC ACCTTATATT CCGATGCCAA 
700
AAGAAAACTA TACTCTGGAG GTTTGTGAAT CACTGGAGGA CTATCTAGAG 
750
CTGCTGCGTT GGTGGGATTA A
800

>AT5G40430.1 longest ORF length:256
MGEPQLFDVP VLEGIKNTTN EIMNQLEDDK MKKTYENKKE ASTSKYLKKS 
50
DITKKRWTES EDIKLKEMVA LEPKKWTKVA KHFEGRTPKQ CRERWHNHAR 
100
PNVKKTTWSE EEDQILIEVH KVIGAKWIQI SEQLPGRSYN NVKNHWNTTK 
150
RRVQNKSGRT VNRVGNNILE NYIRSITINN DDESDGEPTN IENYHDDSED 
200
MLYGEMNLSP EAITQTTKPL TDASTISPYI PMPKENYTLE VCESLEDYLE 
250
LLRWWD
300