Locus |
Common name |
Short description |
AT5G40710 |
|
zinc finger (C2H2 type) family protein (.1) |
>AT5G40710.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
763 |
EcoRI
| G|AATTC |
12 |
PstI
| CTGCA|G |
497 |
PvuII
| CAG|CTG |
500 |
XhoI
| C|TCGAG |
109 |
Click here to view TAIR data
>AT5G40710.1 length:819
ATGGGAAGAT CGAATTCTCA ATGCCCATCT CATTGGATTC TCCTCTGCTT | 50 |
CTTCATCTCT TCTCAGTTTT GGGGATTCTC ACTTCCCACT TCGATAATTC | 100 |
AACAAAATCT CGAGGGTTTT AAAGATCCTG AAGACGGTTT TCATGAGATT | 150 |
CATTGTTCAA GAGAACGTAG CAGAGTTGCT TGGAAAATCA TTCAAGAGTA | 200 |
TCTCATGCCG TATGTGGAAA AGGAGCGGTA TCAGTTACCG AGTACTTGTA | 250 |
GAGTTCATCG AGACAATGAC ATTTATAGAG AACAAGAAGA GCACAAATTG | 300 |
CGTTCAGATA TTAATGAGTG GCGTTGTGGA TTCTGCAAAA AGGCTTTTTA | 350 |
TGAAGAGAAG TATCTCGATA AGCATTTCGA TTCGCGCCAT TACAATTTAC | 400 |
TTAATGCGAG TCATGGTAAA TGTCTGTCGG ATCTTTGTGG AGCGTTGCAT | 450 |
TGTGATCTTG TTGTAGACAC AGCTCGGCTT AAGTCCAAGT GTAATCCTGC | 500 |
AGCTGCTGCA AAAAACCGGC ACTTATGTGA GAGTTTGGCT AATAGTTGTT | 550 |
TTCCGGTAAA TAAAGGTTCA TCAGCCAACC GTCTTCACGA TTTCTTCTTG | 600 |
CGTCAGTTCT GCGATGCACA TACATGTTCA GGAGGATCAA AGCCCTTATC | 650 |
TCAAAAACCA AAGAAGAGGA GTATAGTGTA CATTATTTTC TCCATCATCG | 700 |
TTTTGGTAGT GCTTCTTCTC TATTACAGCT TTGTCTATTT GTTCCGAAGA | 750 |
GGATTAAAGA GAAGATCTCA AGATTTGAAG CGTATTAGAC ACAATGGTCT | 800 |
GAAGAAGAAA CCCTTCTAA | 850 |
>AT5G40710.1 longest ORF length:272
MGRSNSQCPS HWILLCFFIS SQFWGFSLPT SIIQQNLEGF KDPEDGFHEI | 50 |
HCSRERSRVA WKIIQEYLMP YVEKERYQLP STCRVHRDND IYREQEEHKL | 100 |
RSDINEWRCG FCKKAFYEEK YLDKHFDSRH YNLLNASHGK CLSDLCGALH | 150 |
CDLVVDTARL KSKCNPAAAA KNRHLCESLA NSCFPVNKGS SANRLHDFFL | 200 |
RQFCDAHTCS GGSKPLSQKP KKRSIVYIIF SIIVLVVLLL YYSFVYLFRR | 250 |
GLKRRSQDLK RIRHNGLKKK PF | 300 |
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