fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G41030 TCP6 TCP family transcription factor (.1)

>AT5G41030.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 452


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>AT5G41030.1 length:732
ATGGTCATGG AGCCCAAGAA GAACCAAAAT CTACCAAGTT TCTTAAACCC 
50
ATCACGACAG AATCAGGACA ACGACAAGAA GAGGAAACAA ACAGAGGTTA 
100
AAGGTTTCGA CATTGTGGTC GGCGAAAAGA GGAAGAAGAA GGAGAATGAA 
150
GAGGAAGACC AAGAAATTCA GATTCTTTAT GAGAAGGAGA AGAAGAAACC 
200
AAACAAAGAT CGTCACCTTA AAGTTGAAGG AAGAGGTCGT AGAGTTAGGT 
250
TACCTCCACT CTGTGCAGCA AGGATTTATC AATTGACTAA AGAATTAGGT 
300
CACAAATCAG ATGGTGAGAC TCTTGAATGG TTGCTTCAAC ATGCTGAGCC 
350
ATCGATACTC TCTGCTACTG TAAATGGTAT CAAACCCACT GAGTCTGTTG 
400
TTTCTCAACC TCCTCTCACG GCTGATTTGA TGATTTGTCA TAGCGTTGAA 
450
GAAGCTTCAA GGACTCAAAT GGAGGCAAAT GGGTTGTGGA GAAATGAAAC 
500
AGGACAGACC ATTGGAGGGT TTGATCTGAA TTACGGAATT GGGTTTGATT 
550
TCAATGGTGT TCCAGAGATT GGTTTTGGAG ATAATCAAAC GCCTGGACTT 
600
GAATTAAGGC TGTCTCAAGT TGGGGTTTTG AATCCACAGG TTTTTCAACA 
650
AATGGGTAAA GAACAGTTCA GGGTTCTTCA TCATCATTCA CATGAAGATC 
700
AGCAGCAGAG TGCAGAGGAA AATGGTTCAT AA
750

>AT5G41030.1 longest ORF length:243
MVMEPKKNQN LPSFLNPSRQ NQDNDKKRKQ TEVKGFDIVV GEKRKKKENE 
50
EEDQEIQILY EKEKKKPNKD RHLKVEGRGR RVRLPPLCAA RIYQLTKELG 
100
HKSDGETLEW LLQHAEPSIL SATVNGIKPT ESVVSQPPLT ADLMICHSVE 
150
EASRTQMEAN GLWRNETGQT IGGFDLNYGI GFDFNGVPEI GFGDNQTPGL 
200
ELRLSQVGVL NPQVFQQMGK EQFRVLHHHS HEDQQQSAEE NGS
250