fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G41090 ANAC095 NAC domain containing protein 95 (.1)

>AT5G41090.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 3
EcoRV GAT|ATC 136
HindIII A|AGCTT 86
PstI CTGCA|G 569


Click here to view TAIR data

>AT5G41090.1 length:639
ATGGGCCCAA CATACAGAGC TTTGCCAGTA GGTATGAGGT TTCGTCCTTC 
50
AGATTTGGAG TTGGCTGTTT ACTTTTTGAT CAAGAAAGCT TTAGGACTTC 
100
CCATGAAAGC TCTTACTGTG CCCGACGAAT GTAATGATAT CTTCTCAACA 
150
CATCCTCGCG ACTTGCCTGG CTATGGAAGC GAAGAGCATT GGTACTTCTA 
200
CTGCAAGAAA CCCAAGAATC AAGTTACTAG AACGAAATCT TATAACCTCT 
250
GGATACCAAC GGGAGAAAAA ACTGATGTGT TAGATCCAAA GAAGAATGGC 
300
GGCGAATTAG TCGGTATCAA GCATTCGTTT ACTTTCATTG AGAACGAAGA 
350
AGAAGAAGAA TCTGATAACA AGAACGGCGA TGAAGAAGAA CCTCCACAAT 
400
GCAATTGGTT CTTGGATGAA ATCAGCCTCC CATTGACAGT TGTGGATACT 
450
GATTGGACTC TGTGTCATAT CTTTTACGAG AAGGTTAAAC CTGAATTTGG 
500
TAATTTGCAT ATAGTCGAAT CTGAATCCGA ATCCGAAGAA GAAGAAGAAG 
550
ATGAAAGTGT TGATAAGCCT GCAGAGAGTT TGGATAGTGT TAAAGAGAAA 
600
GATGGAACTG TTCTTCCTCC ACCTCCTGCT ACACCTTAG
650

>AT5G41090.1 longest ORF length:212
MGPTYRALPV GMRFRPSDLE LAVYFLIKKA LGLPMKALTV PDECNDIFST 
50
HPRDLPGYGS EEHWYFYCKK PKNQVTRTKS YNLWIPTGEK TDVLDPKKNG 
100
GELVGIKHSF TFIENEEEEE SDNKNGDEEE PPQCNWFLDE ISLPLTVVDT 
150
DWTLCHIFYE KVKPEFGNLH IVESESESEE EEEDESVDKP AESLDSVKEK 
200
DGTVLPPPPA TP
250