Locus |
Common name |
Short description |
AT5G42630 |
KAN4, KANADI4, ATS |
KANADI 4, ABERRANT TESTA SHAPE, Homeodomain-like superfamily protein (.1.2) |
>AT5G42630.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
51 |
SacI
| GAGCT|C |
117, 412 |
Click here to view TAIR data
>AT5G42630.1 length:831
ATGATGATGT TAGAGTCAAG AAACAGTATG AGAGCTTCAA ACTCAGTCCC | 50 |
AGATCTGTCT CTTCAGATCA GTCTTCCTAA CTATCACGCC GGAAAACCTC | 100 |
TTCACGGCGG TGACCGGAGC TCCACAAGCA GTGATTCTGG AAGCAGCCTC | 150 |
AGTGACCTGA GCCATGAGAA CAACTTCTTC AACAAACCTC TCTTGAGCTT | 200 |
AGGATTTGAC CATCATCATC AAAGGCGCTC AAACATGTTC CAACCTCAAA | 250 |
TCTACGGTCG AGATTTCAAG AGAAGCTCAT CATCAATGGT TGGTCTTAAA | 300 |
CGAAGCATTC GTGCTCCAAG AATGAGATGG ACTTCTACTC TTCATGCTCA | 350 |
CTTCGTCCAT GCTGTTCAAC TTCTTGGCGG CCATGAAAGA GCAACGCCTA | 400 |
AATCAGTGTT GGAGCTCATG AATGTGAAGG ATCTAACCCT AGCTCATGTC | 450 |
AAGAGTCACT TGCAGATGTA TAGAACAGTG AAATGCACTG ATAAAGGATC | 500 |
ACCAGGAGAA GGAAAGGTAG AGAAAGAGGC AGAGCAGAGG ATAGAGGACA | 550 |
ATAATAATAA TGAAGAAGCT GATGAAGGAA CTGACACAAA TTCGCCAAAC | 600 |
TCATCATCTG TGCAAAAGAC CCAAAGAGCT TCATGGTCAT CGACAAAGGA | 650 |
AGTATCTAGG AGCATATCTA CACAAGCATA TTCTCACTTG GGAACAACTC | 700 |
ATCACACTAA GGACAATGAA GAGAAAGAGG ATACCAACAT TCATCTCAAT | 750 |
TTGGATTTCA CATTGGGGCG GCCTAGTTGG GGGATGGAAT ATGCGGAACC | 800 |
CTCCAGTGAT TTAACCCTTC TCAAGTGCTA A | 850 |
>AT5G42630.1 longest ORF length:276
MMMLESRNSM RASNSVPDLS LQISLPNYHA GKPLHGGDRS STSSDSGSSL | 50 |
SDLSHENNFF NKPLLSLGFD HHHQRRSNMF QPQIYGRDFK RSSSSMVGLK | 100 |
RSIRAPRMRW TSTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV | 150 |
KSHLQMYRTV KCTDKGSPGE GKVEKEAEQR IEDNNNNEEA DEGTDTNSPN | 200 |
SSSVQKTQRA SWSSTKEVSR SISTQAYSHL GTTHHTKDNE EKEDTNIHLN | 250 |
LDFTLGRPSW GMEYAEPSSD LTLLKC | 300 |
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