Locus |
Common name |
Short description |
AT5G42700 |
|
AP2/B3-like transcriptional factor family protein (.1) |
>AT5G42700.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
145 |
NdeI
| CA|TATG |
533 |
Click here to view TAIR data
>AT5G42700.1 length:636
ATGGTGGTCG AAAAACAAAC AAAGTACGAA GAATTTCGTT TGAAAAGAGT | 50 |
GGAAGAGAAC AAGAAACGAA TGGAAGCTCT GAATCTTCCA AAACTCTCTC | 100 |
AAATTCTCAA TTCCACTTCC GTCAAGATTT CTCCGATGAA GAAGAGATCT | 150 |
ATTCCTCGAA CACCAGAGAA GAAGATGGTT GATGTTAAAC GAGTGCACAT | 200 |
ACAGAGAAGG GGAGTGGGCA AGAAGAGAGA TTTATTGAAT CGAGTTTATG | 250 |
TTTCTGAAGA AATCAGAGAT GAGGCCATTT CAAGAGCTAA CAAATTTCAG | 300 |
GATGAATTGG GGAGTGGTTA TCCAAGTTTT GTGAAATCTA TGCTTCAATC | 350 |
ACATGTTTCT GGTGGCTTCT GGCTGGGTCT TCCAGTGCAA TTTTGCAAAT | 400 |
CTCACCTCGG GTTACATGAT GGTGTCATAA CTTTGATAGA TGAAGAAGGC | 450 |
GAGGAGTATG AGACTATCTA CTTAGCGAGA AAGAATGGAC TTAGTGGTGG | 500 |
ATGGATGGGA TTTGCGGTTG CTCACAATCT AGCATATGGG GATACTCTTG | 550 |
TTTTCGAGTT AGTTCGTCGT ACCGCTTTCA AGGTTTACAT TACAAGAGTT | 600 |
GGAAGTTGTG GAGAAAGCTC CAAAGATATG AGCTGA | 650 |
>AT5G42700.1 longest ORF length:211
MVVEKQTKYE EFRLKRVEEN KKRMEALNLP KLSQILNSTS VKISPMKKRS | 50 |
IPRTPEKKMV DVKRVHIQRR GVGKKRDLLN RVYVSEEIRD EAISRANKFQ | 100 |
DELGSGYPSF VKSMLQSHVS GGFWLGLPVQ FCKSHLGLHD GVITLIDEEG | 150 |
EEYETIYLAR KNGLSGGWMG FAVAHNLAYG DTLVFELVRR TAFKVYITRV | 200 |
GSCGESSKDM S | 250 |
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