fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G43170 AZF3 zinc-finger protein 3 (.1)

>AT5G43170.1 CDS map

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Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 39
BglII A|GATCT 103


Click here to view TAIR data

>AT5G43170.1 length:582
ATGGCGCTTG AAGCTCTTAA TTCACCAAGA TTGGTCGAGG ATCCCTTAAG 
50
ATTCAATGGC GTTGAGCAGT GGACCAAATG TAAGAAACGA TCCAAACGTT 
100
CGAGATCTGA TCTTCATCAT AACCACCGTC TCACTGAGGA AGAGTATCTA 
150
GCTTTCTGTC TCATGCTTCT TGCTCGGGAT GGCGGCGATC TTGACTCTGT 
200
GACGGTTGCG GAGAAGCCGA GTTATAAGTG TGGCGTTTGT TACAAGACGT 
250
TTTCGTCTTA CCAAGCTCTC GGCGGTCATA AAGCGAGCCA CCGGAGCTTA 
300
TACGGTGGTG GAGAGAATGA TAAATCGACA CCATCCACCG CCGTGAAATC 
350
TCACGTTTGT TCGGTTTGCG GGAAATCTTT CGCCACCGGT CAAGCTCTCG 
400
GCGGCCACAA GCGGTGCCAC TACGATGGTG GCGTTTCGAA CTCGGAAGGT 
450
GTGGGGTCTA CTAGCCACGT CAGCAGTAGT AGCCACCGTG GATTTGACCT 
500
TAATATTATA CCGGTGCAGG GATTTTCGCC GGACGACGAA GTGATGAGTC 
550
CGATGGCGAC TAAGAAGCCT CGCCTGAAGT AA
600

>AT5G43170.1 longest ORF length:193
MALEALNSPR LVEDPLRFNG VEQWTKCKKR SKRSRSDLHH NHRLTEEEYL 
50
AFCLMLLARD GGDLDSVTVA EKPSYKCGVC YKTFSSYQAL GGHKASHRSL 
100
YGGGENDKST PSTAVKSHVC SVCGKSFATG QALGGHKRCH YDGGVSNSEG 
150
VGSTSHVSSS SHRGFDLNII PVQGFSPDDE VMSPMATKKP RLK
200