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| Locus | Common name | Short description |
| AT5G43410 | Integrase-type DNA-binding superfamily protein (.1) |
>AT5G43410.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DdeI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 252, 273, 279, 285 |
| AclI | AA|CGTT | 129 |
| AflIII | A|CPuPyGT | 114 |
| AluI | AG|CT | 169, 348 |
| ApoI | Pu|AATTPy | 316 |
| BanI | G|GPyPuCC | 25 |
| BanII | GPuGCPy|C | 349 |
| BfaI | C|TAG | 153, 300 |
| BsaJI | C|CNNGG | 45, 64, 257 |
| BsiHKAI | G[AT]GC[AT]|C | 349 |
| BslI | CCNNNNN|NNGG | 378 |
| Bsp1286I | G[GAT]GC[CAT]|C | 349 |
| BspHI | T|CATGA | 216 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 25 |
| BssKI | |CCNGG | 44 |
| BstF5I | GGATGNN| | 331 |
| BstXI | CCANNNNN|NTGG | 257 |
| BstYI | Pu|GATCPy | 265 |
| BtgI | C|CPuPyGG | 257 |
| DpnI | GA-CH3|TC | 2, 264 |
| DpnII | |GATC | 2, 264 |
| Fnu4HI | GC|NGC | 78, 150, 171, 195 |
| HaeIII | GG|CC | 188 |
| HinfI | G|ANTC | 93 |
| HpaII | C|CGG | 43 |
| Hpy188I | TCN|GA | 53 |
| HpyCH4III | ACN|GT | 106 |
| HpyCH4IV | A|CGT | 112, 128 |
| HpyCH4V | TG|CA | 76 |
| MboI | |GATC | 2, 264 |
| MseI | T|TAA | 204 |
| MslI | CAPyNN|NNPuTG | 256 |
| MspI | C|CGG | 43 |
| MwoI | GCNNNNN|NNGC | 147 |
| NciI | CC|[CG]GG | 44 |
| NcoI | C|CATGG | 257 |
| NlaIII | CATG| | 32, 181, 215, 226, 256 |
| NlaIV | GGN|NCC | 25 |
| RsaI | GT|AC | 40, 322 |
| SacI | GAGCT|C | 349 |
| Sau3AI | |GATC | 2, 264 |
| ScaI | AGT|ACT | 323 |
| ScrFI | CC|NGG | 44 |
| SmlI | C|TPyPuAG | 355 |
| StyI | C|C[AT][AT]GG | 64, 257 |
| Taqƒ¿I | T|CGA | 13, 95, 132 |
| TfiI | G|A[AT]TC | 93 |
| TseI | G|C[AT]GC | 78, 171, 195 |
| Tsp509I | |AATT | 315 |
Click here to view TAIR data
>AT5G43410.1 length:396
ATGGATCAAG GAGGTCGAGG TGTCGGTGCC GAGCATGGAA AGTACCGGGG | 50 |
AGTTCGGAGA CGACCTTGGG GAAAATATGC AGCAGAGATA CGAGATTCGA | 100 |
GGAAGCACGG TGAACGTGTG TGGCTTGGAA CGTTCGATAC GGCAGAGGAA | 150 |
GCGGCTAGAG CCTATGACCA AGCTGCTTAC TCCATGAGAG GCCAAGCAGC | 200 |
AATCCTTAAC TTCCCTCATG AGTATAACAT GGGGAGTGGT GTCTCTTCTT | 250 |
CCACCGCCAT GGCTGGATCT TCCTCCGCCT CCGCCTCCGC TTCTTCTTCT | 300 |
TCTAGGCAAG TTTTTGAATT TGAGTACTTG GATGATAGTG TTTTGGAGGA | 350 |
GCTCCTTGAG GAAGGAGAGA AACCTAACAA GGGCAAGAAG AAATGA | 400 |
>AT5G43410.1 longest ORF length:131
MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE | 50 |
AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS | 100 |
SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K | 150 |