Locus |
Common name |
Short description |
AT5G43410 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT5G43410.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
257 |
SacI
| GAGCT|C |
349 |
StyI
| C|C[AT][AT]GG |
64, 257 |
Click here to view TAIR data
>AT5G43410.1 length:396
ATGGATCAAG GAGGTCGAGG TGTCGGTGCC GAGCATGGAA AGTACCGGGG | 50 |
AGTTCGGAGA CGACCTTGGG GAAAATATGC AGCAGAGATA CGAGATTCGA | 100 |
GGAAGCACGG TGAACGTGTG TGGCTTGGAA CGTTCGATAC GGCAGAGGAA | 150 |
GCGGCTAGAG CCTATGACCA AGCTGCTTAC TCCATGAGAG GCCAAGCAGC | 200 |
AATCCTTAAC TTCCCTCATG AGTATAACAT GGGGAGTGGT GTCTCTTCTT | 250 |
CCACCGCCAT GGCTGGATCT TCCTCCGCCT CCGCCTCCGC TTCTTCTTCT | 300 |
TCTAGGCAAG TTTTTGAATT TGAGTACTTG GATGATAGTG TTTTGGAGGA | 350 |
GCTCCTTGAG GAAGGAGAGA AACCTAACAA GGGCAAGAAG AAATGA | 400 |
>AT5G43410.1 longest ORF length:131
MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE | 50 |
AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS | 100 |
SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K | 150 |
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