Locus |
Common name |
Short description |
AT5G43540 |
|
C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT5G43540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
143 |
NdeI
| CA|TATG |
157 |
StyI
| C|C[AT][AT]GG |
194, 261 |
Click here to view TAIR data
>AT5G43540.1 length:414
ATGGAGTGTG AGAGATCATC GTCGTCCACG TCATCAGAAA CCGGAGCAGT | 50 |
CAGGCACCGT CGTACGTCGT CGTCGTCAGT CTCCACCGTG ACGAGACGAA | 100 |
TGTACGAGTG CACTTTCTGC AAAAGAGGTT TCACAAACGC ACAAGCTTTA | 150 |
GGTGGTCATA TGAACATCCA TCGACGTGAC CGTCTCAACA AGGCCAAGGT | 200 |
GCAAAACGAT GCTGACGTGG CACTCTCGCA AACTCATAGA TGTTTCCACG | 250 |
TGGCGTCTGA CCTTGGAGGC TACGAGCAAG TAGACTCCGT CGTGTTGAGG | 300 |
ACGACGACCT CGAACTACAT CCAACACTTA CGAATCGGCT CGATGGCTAC | 350 |
AAGGAGAGAA AACGTCGTCG TTGAAGGAAA TGAAATCGAT TTGGAGCTGC | 400 |
GTCTTGGCTT ATGA | 450 |
>AT5G43540.1 longest ORF length:137
MECERSSSST SSETGAVRHR RTSSSSVSTV TRRMYECTFC KRGFTNAQAL | 50 |
GGHMNIHRRD RLNKAKVQND ADVALSQTHR CFHVASDLGG YEQVDSVVLR | 100 |
TTTSNYIQHL RIGSMATRRE NVVVEGNEID LELRLGL | 150 |
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