Locus |
Common name |
Short description |
AT5G43700 |
IAA4, ATAUX2-11 |
indole-3-acetic acid inducible 4, AUXIN INDUCIBLE 2-11, AUX/IAA transcriptional regulator family protein (.1) |
>AT5G43700.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
208, 312 |
HpaI
| GTT|AAC |
31 |
StyI
| C|C[AT][AT]GG |
475 |
Click here to view TAIR data
>AT5G43700.1 length:561
ATGGAAAAAG TTGATGTTTA TGATGAGCTT GTTAACCTAA AGGCAACAGA | 50 |
GCTGAGATTG GGATTACCAG GGACAGAAGA AACTGTTTCT TGTGGAAAAA | 100 |
GCAACAAAAG AGTTTTACCT GAAGCTACTG AGAAAGAGAT TGAATCCACT | 150 |
GGAAAAACTG AAACCGCTTC TCCTCCAAAG GCTCAGATTG TTGGATGGCC | 200 |
ACCAGTTAGA TCTTACAGAA AGAACAATGT TCAGACAAAG AAGAGTGAAT | 250 |
CTGAAGGTCA AGGAAACTAT GTGAAAGTAA GTATGGATGG TGCTCCATAT | 300 |
CTAAGGAAGA TAGATCTAAC GATGTATAAA CAATATCCAG AGTTGATGAA | 350 |
ATCACTTGAA AACATGTTTA AATTCTCTGT GGGAGAATAT TTTGAGAGAG | 400 |
AAGGATATAA AGGCTCAGAC TTTGTACCTA CTTATGAAGA CAAAGATGGT | 450 |
GATTGGATGC TTGTTGGTGA TGTTCCTTGG GAGATGTTTG TTTCGTCTTG | 500 |
TAAGAGGCTA AGGATCATGA AAGGATCTGA AGTTAAAGGT TTAGGTTGTG | 550 |
GTGGTCTTTA A | 600 |
>AT5G43700.1 longest ORF length:186
MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST | 50 |
GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY | 100 |
LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG | 150 |
DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL | 200 |
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