|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G44080 | Basic-leucine zipper (bZIP) transcription factor family protein (.1) |
>AT5G44080.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 117 |
| HindIII | A|AGCTT | 758, 779, 793 |
| PstI | CTGCA|G | 731 |
| PvuII | CAG|CTG | 689 |
| XbaI | T|CTAGA | 742 |
Click here to view TAIR data
>AT5G44080.1 length:948
ATGACGTCGT TTCAGGTGAT GCGTTCTTCA AATTCGAGAA ACTCGGATCT | 50 |
ATCTCGTCGC ATCTCTTCTG CTTCTACTTC TTCTTCGTCT ATAAGACCTC | 100 |
AACAACAGTT CCGGCGAGAT CTAACAAGTG TCGGTTACGG CGGAAGAAAC | 150 |
GACGGATTAT ACAGTTCAAA TTCGATGACG GTCGAAGGGA TTTTACACGA | 200 |
TACTTTCGCA TCAGATCCAC CAGCACCAAC GGAATCTTCA CTCTTAGATG | 250 |
CGTCGATAAA TCTGATGGAT GCTTCTCCAG CACCAATGGA GATAACAACA | 300 |
ACGACGGCTT CTGATGTTGT GGATCACGGC GGAGGAACGG AGACGACGCG | 350 |
TGGTGGGAAG AGTGTTGATG AGATTTGGAG AGAGATGGTA TCAGGAGAAG | 400 |
GTAAAGGGAT GAAGGAAGAG ACGTCGGAAG AGATAATGAC GTTAGAGGAT | 450 |
TTTCTAGCGA AAGCTGCGGT GGAAGACGAA ACAGCGGTGA CGGCGTCGGC | 500 |
GGAGGATTTG GATGTGAAGA TTCCGGTGAC GAATTACGGA TTCGATCATT | 550 |
CTGCACCGCC GCATAATCCG TTTCAGATGA TTGATAAAGT AGAAGGATCA | 600 |
ATAGTTGCGT TTGGGAATGG TTTAGATGTT TACGGAGGAG GAGCTAGAGG | 650 |
GAAGAGAGCG AGAGTGATGG TTGAGCCATT GGATAAAGCA GCTGCACAGA | 700 |
GACAGAGAAG GATGATTAAG AATCGTGAAT CTGCAGCTAG GTCTAGAGAG | 750 |
AGGAAACAAG CTTATCAAGT TGAGTTAGAA GCTTTGGCTG CGAAGCTTGA | 800 |
GGAAGAGAAT GAGTTGCTTT CTAAGGAGAT TGAAGATAAG AGGAAAGAGA | 850 |
GATACCAGAA GTTGATGGAG TTTGTGATTC CTGTTGTTGA GAAACCGAAG | 900 |
CAGCAGCCAC CACGGTTTTT ACGCAGGATT CGGTCTTTGG AATGGTGA | 950 |
>AT5G44080.1 longest ORF length:315
MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN | 50 |
DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT | 100 |
TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED | 150 |
FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS | 200 |
IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE | 250 |
RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK | 300 |
QQPPRFLRRI RSLEW | 350 |