| Locus |
Common name |
Short description |
| AT5G44210 |
AtERF9, ATERF-9 |
ERF DOMAIN PROTEIN- 9, erf domain protein 9 (.1) |
>AT5G44210.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DdeI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccI
| GT|[AC][TG]AC |
279 |
| AccII(FnuDII)
| CG|CG |
130, 342, 354 |
| AciI
| C|CGC |
219 |
| AflIII
| A|CPuPyGT |
355 |
| AgeI
| A|CCGGT |
585 |
| AluI
| AG|CT |
199, 208, 442, 462, 577 |
| ApaLI
| G|TGCAC |
91 |
| AvaI
| C|PyCGPuG |
150, 164, 175, 470 |
| BfaI
| C|TAG |
225, 575 |
| BsaJI
| C|CNNGG |
118, 150, 164 |
| BsaWI
| [AT]|CCGG[AT] |
480, 495, 585 |
| BsiHKAI
| G[AT]GC[AT]|C |
91 |
| BsiWI
| C|GTACG |
325 |
| BslI
| CCNNNNN|NNGG |
149, 169, 270, 329 |
| BsoBI
| C|PyCGPuG |
150, 164, 175, 470 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
91 |
| BsrFI
| Pu|CCGGPy |
585 |
| BssKI
| |CCNGG |
149, 163, 270, 383, 563 |
| BstNI
| CC|[AT]GG |
563 |
| BstUI
| CG|CG |
130, 342, 354 |
| BstYI
| Pu|GATCPy |
140, 567 |
| BtgI
| C|CPuPyGG |
118 |
| Cfr10I
| [AG]|CCGG[TC] |
585 |
| DpnI
| GA-CH3|TC |
139, 431, 491, 566 |
| DpnII
| |GATC |
139, 431, 491, 566 |
| Fnu4HI
| GC|NGC |
46, 132, 201, 222, 444 |
| HhaI
| GCG|C |
341 |
| HinP1I
| G|CGC |
341 |
| HincII
| GTPy|PuAC |
289, 319 |
| HinfI
| G|ANTC |
276, 309 |
| HpaI
| GTT|AAC |
289 |
| HpaII
| C|CGG |
149, 163, 270, 382, 479, 494, 584 |
| Hpy188I
| TCN|GA |
359 |
| Hpy99I
| CG[AT]CG| |
73, 293, 328, 337, 398 |
| HpyCH4III
| ACN|GT |
19, 285, 295, 322, 330, 531 |
| HpyCH4IV
| A|CGT |
315, 594 |
| HpyCH4V
| TG|CA |
90, 202, 373 |
| MboI
| |GATC |
139, 431, 491, 566 |
| MluI
| A|CGCGT |
355 |
| MseI
| T|TAA |
288, 452, 498, 570 |
| MslI
| CAPyNN|NNPuTG |
34 |
| MspI
| C|CGG |
149, 163, 270, 382, 479, 494, 584 |
| MwoI
| GCNNNNN|NNGC |
198 |
| N.BstNBI
| GAGTCNNNN|N |
281 |
| NciI
| CC|[CG]GG |
149, 163, 270, 383 |
| NcoI
| C|CATGG |
118 |
| NlaIII
| CATG| |
117, 375 |
| NlaIV
| GGN|NCC |
3, 241 |
| NspI
| PuCATG|Py |
376 |
| PspGI
| |CC[AT]GG |
563 |
| RsaI
| GT|AC |
324 |
| Sau3AI
| |GATC |
139, 431, 491, 566 |
| ScrFI
| CC|NGG |
149, 163, 270, 383, 563 |
| SgrAI
| CPu|CCGGPyG |
586 |
| SmaI
| CCC|GGG |
150, 164 |
| StyI
| C|C[AT][AT]GG |
118 |
| Taqƒ¿I
| T|CGA |
183, 429, 504, 523 |
| TfiI
| G|A[AT]TC |
309 |
| TseI
| G|C[AT]GC |
201, 444 |
| Tsp45I
| |GT[CG]AC |
145, 333, 379 |
| Tsp509I
| |AATT |
257 |
| XmaI
| C|CCGGG |
150, 164 |
Click here to view TAIR data
>AT5G44210.1 length:603
ATGGCTCCAA GACAGGCGAA CGGTAGAAGC ATTGCCGTGA GTGAAGGCGG | 50 |
CGGAGGGAAG ACGATGACGA TGACGACGAT GCGGAAGGAA GTGCACTTTA | 100 |
GAGGTGTGAG GAAGCGTCCA TGGGGTAGAT ACGCGGCGGA GATCCGTGAC | 150 |
CCGGGAAAGA AAACCCGGGT TTGGCTCGGG ACATTCGACA CGGCGGAGGA | 200 |
AGCTGCAAGA GCTTACGACA CCGCCGCTAG AGAGTTTCGT GGCTCCAAAG | 250 |
CAAAGACTAA TTTCCCTCTT CCCGGAGAGT CTACTACGGT TAACGACGGT | 300 |
GGCGAGAACG ATTCTTACGT CAACCGTACG ACGGTGACGA CGGCGCGTGA | 350 |
GATGACGCGT CAGAGATTTC CGTTTGCATG TCACCGGGAG CGTAAAGTCG | 400 |
TCGGTGGTTA TGCTTCTGCT GGTTTTTTCT TCGATCCGTC AAGAGCTGCT | 450 |
TCGTTAAGAG CAGAGCTTTC TCGGGTTTGT CCGGTTCGGT TTGATCCGGT | 500 |
TAATATCGAG TTGAGTATTG GTATTCGAGA AACCGTAAAA GTTGAACCGA | 550 |
GAAGAGAACT AAACCTGGAT CTTAACCTAG CTCCACCGGT GGTGGACGTT | 600 |
TAG | 650 |
>AT5G44210.1 longest ORF length:200
MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD | 50 |
PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG | 100 |
GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA | 150 |
SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV | 200 |
|