Locus |
Common name |
Short description |
AT5G44210 |
AtERF9, ATERF-9 |
ERF DOMAIN PROTEIN- 9, erf domain protein 9 (.1) |
>AT5G44210.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HpaI
| GTT|AAC |
289 |
NcoI
| C|CATGG |
118 |
SmaI
| CCC|GGG |
150, 164 |
StyI
| C|C[AT][AT]GG |
118 |
Click here to view TAIR data
>AT5G44210.1 length:603
ATGGCTCCAA GACAGGCGAA CGGTAGAAGC ATTGCCGTGA GTGAAGGCGG | 50 |
CGGAGGGAAG ACGATGACGA TGACGACGAT GCGGAAGGAA GTGCACTTTA | 100 |
GAGGTGTGAG GAAGCGTCCA TGGGGTAGAT ACGCGGCGGA GATCCGTGAC | 150 |
CCGGGAAAGA AAACCCGGGT TTGGCTCGGG ACATTCGACA CGGCGGAGGA | 200 |
AGCTGCAAGA GCTTACGACA CCGCCGCTAG AGAGTTTCGT GGCTCCAAAG | 250 |
CAAAGACTAA TTTCCCTCTT CCCGGAGAGT CTACTACGGT TAACGACGGT | 300 |
GGCGAGAACG ATTCTTACGT CAACCGTACG ACGGTGACGA CGGCGCGTGA | 350 |
GATGACGCGT CAGAGATTTC CGTTTGCATG TCACCGGGAG CGTAAAGTCG | 400 |
TCGGTGGTTA TGCTTCTGCT GGTTTTTTCT TCGATCCGTC AAGAGCTGCT | 450 |
TCGTTAAGAG CAGAGCTTTC TCGGGTTTGT CCGGTTCGGT TTGATCCGGT | 500 |
TAATATCGAG TTGAGTATTG GTATTCGAGA AACCGTAAAA GTTGAACCGA | 550 |
GAAGAGAACT AAACCTGGAT CTTAACCTAG CTCCACCGGT GGTGGACGTT | 600 |
TAG | 650 |
>AT5G44210.1 longest ORF length:200
MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD | 50 |
PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG | 100 |
GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA | 150 |
SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV | 200 |
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