fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G44210 AtERF9, ATERF-9 ERF DOMAIN PROTEIN- 9, erf domain protein 9 (.1)

>AT5G44210.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 289
NcoI C|CATGG 118
SmaI CCC|GGG 150, 164
StyI C|C[AT][AT]GG 118


Click here to view TAIR data

>AT5G44210.1 length:603
ATGGCTCCAA GACAGGCGAA CGGTAGAAGC ATTGCCGTGA GTGAAGGCGG 
50
CGGAGGGAAG ACGATGACGA TGACGACGAT GCGGAAGGAA GTGCACTTTA 
100
GAGGTGTGAG GAAGCGTCCA TGGGGTAGAT ACGCGGCGGA GATCCGTGAC 
150
CCGGGAAAGA AAACCCGGGT TTGGCTCGGG ACATTCGACA CGGCGGAGGA 
200
AGCTGCAAGA GCTTACGACA CCGCCGCTAG AGAGTTTCGT GGCTCCAAAG 
250
CAAAGACTAA TTTCCCTCTT CCCGGAGAGT CTACTACGGT TAACGACGGT 
300
GGCGAGAACG ATTCTTACGT CAACCGTACG ACGGTGACGA CGGCGCGTGA 
350
GATGACGCGT CAGAGATTTC CGTTTGCATG TCACCGGGAG CGTAAAGTCG 
400
TCGGTGGTTA TGCTTCTGCT GGTTTTTTCT TCGATCCGTC AAGAGCTGCT 
450
TCGTTAAGAG CAGAGCTTTC TCGGGTTTGT CCGGTTCGGT TTGATCCGGT 
500
TAATATCGAG TTGAGTATTG GTATTCGAGA AACCGTAAAA GTTGAACCGA 
550
GAAGAGAACT AAACCTGGAT CTTAACCTAG CTCCACCGGT GGTGGACGTT 
600
TAG
650

>AT5G44210.1 longest ORF length:200
MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD 
50
PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG 
100
GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA 
150
SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV 
200