fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G45300 BAM8, BMY2 BETA-AMYLASE 8, beta-amylase 2 (.1.2)

>AT5G45300.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 493
HindIII A|AGCTT 289, 1206
PstI CTGCA|G 137, 1664
SacI GAGCT|C 949
SmaI CCC|GGG 640
SpeI A|CTAGT 319, 658


Click here to view TAIR data

>AT5G45300.1 length:2070
ATGCATACTC TCAACAACAC CATCACCACC ACCACCGGTT CGCAAGATCC 
50
GAATCTCGAC CCAATTCCAG ACCCGGATCA ATTTCCCAAC CGGAACCGCA 
100
ACCAACCACA ATCTCGCCGC CCTCGCGGAT TCGCCGCTGC AGCAGCAGCA 
150
GCGTCGATAG CTCCAACGGA AAACGATGTA AACAACGGAA ACATCGCCGG 
200
AATCGGCGGT GGAGAAGGAA GCAGCGGCGG CGGAGGAGGT GGAGGAGGGA 
250
AAGGGAAGAG AGAGAGGGAG AAGGAAAAAG AGAGAACGAA GCTTAGAGAA 
300
AGACATAGAC GAGCAATCAC TAGTAGAATG CTCGCCGGAT TAAGACAGTA 
350
CGGTAATTTT CCGTTACCGG CGCGTGCTGA TATGAATGAC GTAATCGCTG 
400
CTTTGGCTCG TGAAGCTGGT TGGAGTGTTG AAGCCGATGG TACTACTTAT 
450
CGGCAATCAC AGCAACCAAA TCATGTGGTA CAGTTTCCGA CGAGATCTAT 
500
TGAGAGTCCA CTTTCTTCTA GTACATTGAA GAACTGTGCT AAGGCTGCAA 
550
TTGAATCTCA GCAGCATTCA GTTCTTAGGA ACGATGAGAA ACTTGCTCCT 
600
GTGTCTCTTG ATTCTATTGG TATTGCCGAG AGTGATCATC CCGGGAATGG 
650
AAGGTATACT AGTGTTAGTC CTATCACCTC CGTTGGATGC TTGGAAGCCA 
700
ATCAGCTTAT ACAAGATGTT CATTCCGCAG AGCAATGTAA TGACTTCACA 
750
GAGAGCTTTT ATGTCCCTGT GTACGCCATG CTTCCAGTTG GCATTATAGA 
800
CAACTTTGGC CAGTTGGTTG ATCCTGAAGG TGTAAGACAA GAATTAAGTT 
850
ACATGAAGTC ATTAAATGTC GATGGAGTAG TAATAGATTG TTGGTGGGGA 
900
ATAGTTGAAG GATGGAACCC TCAGAAATAT GTATGGTCTG GCTATAGGGA 
950
GCTCTTTAAC CTTATCAGAG ACTTCAAACT TAAGCTACAG GTGGTGATGG 
1000
CATTTCATGA GTATGGAGGG AATGCATCTG GGAATGTGAT GATTTCGTTG 
1050
CCACAGTGGG TGTTGAAGAT TGGGAAAGAC AATCCAGACA TTTTTTTCAC 
1100
TGATCGTGAA GGAAGAAGAA GTTTCGAGTG TTTGAATTGG AGCATTGACA 
1150
AGGAACGGGT ATTGCATGGA CGAACTGGTA TAGAGGTCTA TTTTGATTTT 
1200
ATGAGAAGCT TCCGGTCAGA GTTTGATGAC TTGTTTGTGG AAGGACTAAT 
1250
TACTGCGGTT GAGATTGGTC TTGGAGCTTC TGGTGAACTA AAGTACCCAT 
1300
CTTTCCCAGA AAGGATGGGT TGGATTTATC CCGGTATCGG TGAGTTTCAG 
1350
TGTTATGACA AATATTCGCA ATTGAGTCTG CAAAAGGAAG CAAAGTCACG 
1400
AGGATTCACT TTCTGGGGTA AAGGACCAGA GAATGCTGGT CAATACAGTT 
1450
CTCATCCACA TGAAACTGTG TTCTTCCAAG AAAGAGGTGA ATATGACAGC 
1500
TATTATGGCC GCTTCTTCTT AAATTGGTAC TCACAATTGC TAATTGGTCA 
1550
TGCTGAGAAT GTTCTGTCTC TTGCAAATCT CGCATTTGAG GAGACGAAGA 
1600
TTATTGTCAA GATACCGGCA ATATACTGGT CATACAAGAC AGCTAGTCAT 
1650
GCTGCTGAAT TAACTGCAGG ATACTACAAC CCTTCAAACC GTGATGGGTA 
1700
CTCTCTTGTT TTCGAAACTC TGAAGAAATA TTCCGTGACT GTGAAGTTTG 
1750
TGTGCCCTGG GCCACAAATG TCTCCCAATG CGCATGAAGA AGCATTAGCT 
1800
GATCCAGAAG GTTTAAGTTG GCAGGTGATC AACGCAGCTT GGGATAAGGG 
1850
ACTTCAAATC GGTGGAGAGA ATGCGATTAC TTGTTTCGAC AGAGATGGTT 
1900
GTATGAGATT AATCGATATA GCTAAACCAA GAAACCATCC AGATGGCTAT 
1950
CACTTCTCCT TCTTCACATA TCGTCAACCT TCTCCTCTGG TTCAAGGATC 
2000
TACTTGCTTT CCAGATTTGG ACTACTTCAT TAAACGCATG CATGGCGACA 
2050
TAAGAGATAA ACAGTTTTAG 
2100

>AT5G45300.1 longest ORF length:689
MHTLNNTITT TTGSQDPNLD PIPDPDQFPN RNRNQPQSRR PRGFAAAAAA 
50
ASIAPTENDV NNGNIAGIGG GEGSSGGGGG GGGKGKRERE KEKERTKLRE 
100
RHRRAITSRM LAGLRQYGNF PLPARADMND VIAALAREAG WSVEADGTTY 
150
RQSQQPNHVV QFPTRSIESP LSSSTLKNCA KAAIESQQHS VLRNDEKLAP 
200
VSLDSIGIAE SDHPGNGRYT SVSPITSVGC LEANQLIQDV HSAEQCNDFT 
250
ESFYVPVYAM LPVGIIDNFG QLVDPEGVRQ ELSYMKSLNV DGVVIDCWWG 
300
IVEGWNPQKY VWSGYRELFN LIRDFKLKLQ VVMAFHEYGG NASGNVMISL 
350
PQWVLKIGKD NPDIFFTDRE GRRSFECLNW SIDKERVLHG RTGIEVYFDF 
400
MRSFRSEFDD LFVEGLITAV EIGLGASGEL KYPSFPERMG WIYPGIGEFQ 
450
CYDKYSQLSL QKEAKSRGFT FWGKGPENAG QYSSHPHETV FFQERGEYDS 
500
YYGRFFLNWY SQLLIGHAEN VLSLANLAFE ETKIIVKIPA IYWSYKTASH 
550
AAELTAGYYN PSNRDGYSLV FETLKKYSVT VKFVCPGPQM SPNAHEEALA 
600
DPEGLSWQVI NAAWDKGLQI GGENAITCFD RDGCMRLIDI AKPRNHPDGY 
650
HFSFFTYRQP SPLVQGSTCF PDLDYFIKRM HGDIRDKQF
700