fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G45300 BAM8, BMY2 BETA-AMYLASE 8, beta-amylase 2 (.1.2)

>AT5G45300.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 487
HindIII A|AGCTT 289, 1200
PstI CTGCA|G 137, 1658
SacI GAGCT|C 943
SmaI CCC|GGG 634
SpeI A|CTAGT 319, 652


Click here to view TAIR data

>AT5G45300.2 length:2064
ATGCATACTC TCAACAACAC CATCACCACC ACCACCGGTT CGCAAGATCC 
50
GAATCTCGAC CCAATTCCAG ACCCGGATCA ATTTCCCAAC CGGAACCGCA 
100
ACCAACCACA ATCTCGCCGC CCTCGCGGAT TCGCCGCTGC AGCAGCAGCA 
150
GCGTCGATAG CTCCAACGGA AAACGATGTA AACAACGGAA ACATCGCCGG 
200
AATCGGCGGT GGAGAAGGAA GCAGCGGCGG CGGAGGAGGT GGAGGAGGGA 
250
AAGGGAAGAG AGAGAGGGAG AAGGAAAAAG AGAGAACGAA GCTTAGAGAA 
300
AGACATAGAC GAGCAATCAC TAGTAGAATG CTCGCCGGAT TAAGACAGTA 
350
CGGTAATTTT CCGTTACCGG CGCGTGCTGA TATGAATGAC GTAATCGCTG 
400
CTTTGGCTCG TGAAGCTGGT TGGAGTGTTG AAGCCGATGG TACTACTTAT 
450
CGGCAATCAC AGCAACCAAA TCATGTGTTT CCGACGAGAT CTATTGAGAG 
500
TCCACTTTCT TCTAGTACAT TGAAGAACTG TGCTAAGGCT GCAATTGAAT 
550
CTCAGCAGCA TTCAGTTCTT AGGAACGATG AGAAACTTGC TCCTGTGTCT 
600
CTTGATTCTA TTGGTATTGC CGAGAGTGAT CATCCCGGGA ATGGAAGGTA 
650
TACTAGTGTT AGTCCTATCA CCTCCGTTGG ATGCTTGGAA GCCAATCAGC 
700
TTATACAAGA TGTTCATTCC GCAGAGCAAT GTAATGACTT CACAGAGAGC 
750
TTTTATGTCC CTGTGTACGC CATGCTTCCA GTTGGCATTA TAGACAACTT 
800
TGGCCAGTTG GTTGATCCTG AAGGTGTAAG ACAAGAATTA AGTTACATGA 
850
AGTCATTAAA TGTCGATGGA GTAGTAATAG ATTGTTGGTG GGGAATAGTT 
900
GAAGGATGGA ACCCTCAGAA ATATGTATGG TCTGGCTATA GGGAGCTCTT 
950
TAACCTTATC AGAGACTTCA AACTTAAGCT ACAGGTGGTG ATGGCATTTC 
1000
ATGAGTATGG AGGGAATGCA TCTGGGAATG TGATGATTTC GTTGCCACAG 
1050
TGGGTGTTGA AGATTGGGAA AGACAATCCA GACATTTTTT TCACTGATCG 
1100
TGAAGGAAGA AGAAGTTTCG AGTGTTTGAA TTGGAGCATT GACAAGGAAC 
1150
GGGTATTGCA TGGACGAACT GGTATAGAGG TCTATTTTGA TTTTATGAGA 
1200
AGCTTCCGGT CAGAGTTTGA TGACTTGTTT GTGGAAGGAC TAATTACTGC 
1250
GGTTGAGATT GGTCTTGGAG CTTCTGGTGA ACTAAAGTAC CCATCTTTCC 
1300
CAGAAAGGAT GGGTTGGATT TATCCCGGTA TCGGTGAGTT TCAGTGTTAT 
1350
GACAAATATT CGCAATTGAG TCTGCAAAAG GAAGCAAAGT CACGAGGATT 
1400
CACTTTCTGG GGTAAAGGAC CAGAGAATGC TGGTCAATAC AGTTCTCATC 
1450
CACATGAAAC TGTGTTCTTC CAAGAAAGAG GTGAATATGA CAGCTATTAT 
1500
GGCCGCTTCT TCTTAAATTG GTACTCACAA TTGCTAATTG GTCATGCTGA 
1550
GAATGTTCTG TCTCTTGCAA ATCTCGCATT TGAGGAGACG AAGATTATTG 
1600
TCAAGATACC GGCAATATAC TGGTCATACA AGACAGCTAG TCATGCTGCT 
1650
GAATTAACTG CAGGATACTA CAACCCTTCA AACCGTGATG GGTACTCTCT 
1700
TGTTTTCGAA ACTCTGAAGA AATATTCCGT GACTGTGAAG TTTGTGTGCC 
1750
CTGGGCCACA AATGTCTCCC AATGCGCATG AAGAAGCATT AGCTGATCCA 
1800
GAAGGTTTAA GTTGGCAGGT GATCAACGCA GCTTGGGATA AGGGACTTCA 
1850
AATCGGTGGA GAGAATGCGA TTACTTGTTT CGACAGAGAT GGTTGTATGA 
1900
GATTAATCGA TATAGCTAAA CCAAGAAACC ATCCAGATGG CTATCACTTC 
1950
TCCTTCTTCA CATATCGTCA ACCTTCTCCT CTGGTTCAAG GATCTACTTG 
2000
CTTTCCAGAT TTGGACTACT TCATTAAACG CATGCATGGC GACATAAGAG 
2050
ATAAACAGTT TTAG
2100

>AT5G45300.2 longest ORF length:687
MHTLNNTITT TTGSQDPNLD PIPDPDQFPN RNRNQPQSRR PRGFAAAAAA 
50
ASIAPTENDV NNGNIAGIGG GEGSSGGGGG GGGKGKRERE KEKERTKLRE 
100
RHRRAITSRM LAGLRQYGNF PLPARADMND VIAALAREAG WSVEADGTTY 
150
RQSQQPNHVF PTRSIESPLS SSTLKNCAKA AIESQQHSVL RNDEKLAPVS 
200
LDSIGIAESD HPGNGRYTSV SPITSVGCLE ANQLIQDVHS AEQCNDFTES 
250
FYVPVYAMLP VGIIDNFGQL VDPEGVRQEL SYMKSLNVDG VVIDCWWGIV 
300
EGWNPQKYVW SGYRELFNLI RDFKLKLQVV MAFHEYGGNA SGNVMISLPQ 
350
WVLKIGKDNP DIFFTDREGR RSFECLNWSI DKERVLHGRT GIEVYFDFMR 
400
SFRSEFDDLF VEGLITAVEI GLGASGELKY PSFPERMGWI YPGIGEFQCY 
450
DKYSQLSLQK EAKSRGFTFW GKGPENAGQY SSHPHETVFF QERGEYDSYY 
500
GRFFLNWYSQ LLIGHAENVL SLANLAFEET KIIVKIPAIY WSYKTASHAA 
550
ELTAGYYNPS NRDGYSLVFE TLKKYSVTVK FVCPGPQMSP NAHEEALADP 
600
EGLSWQVINA AWDKGLQIGG ENAITCFDRD GCMRLIDIAK PRNHPDGYHF 
650
SFFTYRQPSP LVQGSTCFPD LDYFIKRMHG DIRDKQF
700