fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G45420 maMYB membrane anchored MYB, Duplicated homeodomain-like superfamily protein (.1)

>AT5G45420.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 275
EcoRI G|AATTC 711
HindIII A|AGCTT 100, 674, 794
PstI CTGCA|G 839
PvuII CAG|CTG 527, 836
SacI GAGCT|C 906


Click here to view TAIR data

>AT5G45420.1 length:930
ATGGATTTTT TCGACGAAGA CAGGCCTAGA TTCGTTTTCC AATCTCGTCC 
50
TTCTTCTTCT CACACGGCGG AGGAAGAAGA AGAAGCTAGA ATCCCTAACA 
100
AGCTTTTCAT TTCAATCTCC GTCTCAATCT CCCTCATCAT ATTATCTCTC 
150
TCCTTCTTCT ACTTCGAATC TGAACCTGCC AAATCGCTAC TATTATGGCT 
200
TTCCCTCTCT TTCCTCGTCG GTCCTTTCGC TCCTAGCTCG CTCACCGGAG 
250
GTAAGATTCG CGTCGGTTAT GGTCAGATCT TGGAGCCAGA ACAGATTCAC 
300
GATGAGTCAT CCACGGATAA CGAACGTGAA TCCAGGAGGA AATCGGTGAA 
350
TAAGCGATCT AAAGGTTCGA CGAAGAGCGA TAATCCGCCG GAAAATGCTT 
400
CTGCGGTGAC TGAAGTTTCG AGGAAAGTGG TGATTCCGCA GTCTAAGGAG 
450
AGTGGATCTG TGAATGAAAC TAAAGATTGG ACTGCTGAAG AGATCGAGAT 
500
TTTGAAGAAG CAGTTGATTA AGCATCCAGC TGGTAAACCT GGGAGATGGG 
550
AGACGGTGGC TTCAGCGTTC GGAGGAAGAT ACAAGACAGA GAATGTGATT 
600
AAGAAGGCGA AAGAGATAGG TGAGAAGAAA ATCTATGAGA GTGATGATTA 
650
CGCTCAGTTT TTAAAGAATA GGAAAGCTTC AGATCCTAGA TTGGTTGATG 
700
AAAACGAAGA GAATTCTGGA GCTGGTGGAG ATGCGGAAGG TACTAAGGAG 
750
ATTTGGAGTA ATGGAGAAGA CATTGCATTG CTCAATGCTT TAAAAGCTTT 
800
TCCTAAGGAG GCAGCTATGA GATGGGAGAA GATTGCAGCT GCAGTACCTG 
850
GGAAGTCGAA AGCAGCTTGT ATGAAGAGAG TTACTGAGCT TAAAAAAGGG 
900
TTTCGGAGCT CGAAAACTCC AGCTAATTAA 
950

>AT5G45420.1 longest ORF length:309
MDFFDEDRPR FVFQSRPSSS HTAEEEEEAR IPNKLFISIS VSISLIILSL 
50
SFFYFESEPA KSLLLWLSLS FLVGPFAPSS LTGGKIRVGY GQILEPEQIH 
100
DESSTDNERE SRRKSVNKRS KGSTKSDNPP ENASAVTEVS RKVVIPQSKE 
150
SGSVNETKDW TAEEIEILKK QLIKHPAGKP GRWETVASAF GGRYKTENVI 
200
KKAKEIGEKK IYESDDYAQF LKNRKASDPR LVDENEENSG AGGDAEGTKE 
250
IWSNGEDIAL LNALKAFPKE AAMRWEKIAA AVPGKSKAAC MKRVTELKKG 
300
FRSSKTPAN
350