Locus |
Common name |
Short description |
AT5G45420 |
maMYB |
membrane anchored MYB, Duplicated homeodomain-like superfamily protein (.1) |
>AT5G45420.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
275 |
EcoRI
| G|AATTC |
711 |
HindIII
| A|AGCTT |
100, 674, 794 |
PstI
| CTGCA|G |
839 |
PvuII
| CAG|CTG |
527, 836 |
SacI
| GAGCT|C |
906 |
Click here to view TAIR data
>AT5G45420.1 length:930
ATGGATTTTT TCGACGAAGA CAGGCCTAGA TTCGTTTTCC AATCTCGTCC | 50 |
TTCTTCTTCT CACACGGCGG AGGAAGAAGA AGAAGCTAGA ATCCCTAACA | 100 |
AGCTTTTCAT TTCAATCTCC GTCTCAATCT CCCTCATCAT ATTATCTCTC | 150 |
TCCTTCTTCT ACTTCGAATC TGAACCTGCC AAATCGCTAC TATTATGGCT | 200 |
TTCCCTCTCT TTCCTCGTCG GTCCTTTCGC TCCTAGCTCG CTCACCGGAG | 250 |
GTAAGATTCG CGTCGGTTAT GGTCAGATCT TGGAGCCAGA ACAGATTCAC | 300 |
GATGAGTCAT CCACGGATAA CGAACGTGAA TCCAGGAGGA AATCGGTGAA | 350 |
TAAGCGATCT AAAGGTTCGA CGAAGAGCGA TAATCCGCCG GAAAATGCTT | 400 |
CTGCGGTGAC TGAAGTTTCG AGGAAAGTGG TGATTCCGCA GTCTAAGGAG | 450 |
AGTGGATCTG TGAATGAAAC TAAAGATTGG ACTGCTGAAG AGATCGAGAT | 500 |
TTTGAAGAAG CAGTTGATTA AGCATCCAGC TGGTAAACCT GGGAGATGGG | 550 |
AGACGGTGGC TTCAGCGTTC GGAGGAAGAT ACAAGACAGA GAATGTGATT | 600 |
AAGAAGGCGA AAGAGATAGG TGAGAAGAAA ATCTATGAGA GTGATGATTA | 650 |
CGCTCAGTTT TTAAAGAATA GGAAAGCTTC AGATCCTAGA TTGGTTGATG | 700 |
AAAACGAAGA GAATTCTGGA GCTGGTGGAG ATGCGGAAGG TACTAAGGAG | 750 |
ATTTGGAGTA ATGGAGAAGA CATTGCATTG CTCAATGCTT TAAAAGCTTT | 800 |
TCCTAAGGAG GCAGCTATGA GATGGGAGAA GATTGCAGCT GCAGTACCTG | 850 |
GGAAGTCGAA AGCAGCTTGT ATGAAGAGAG TTACTGAGCT TAAAAAAGGG | 900 |
TTTCGGAGCT CGAAAACTCC AGCTAATTAA | 950 |
>AT5G45420.1 longest ORF length:309
MDFFDEDRPR FVFQSRPSSS HTAEEEEEAR IPNKLFISIS VSISLIILSL | 50 |
SFFYFESEPA KSLLLWLSLS FLVGPFAPSS LTGGKIRVGY GQILEPEQIH | 100 |
DESSTDNERE SRRKSVNKRS KGSTKSDNPP ENASAVTEVS RKVVIPQSKE | 150 |
SGSVNETKDW TAEEIEILKK QLIKHPAGKP GRWETVASAF GGRYKTENVI | 200 |
KKAKEIGEKK IYESDDYAQF LKNRKASDPR LVDENEENSG AGGDAEGTKE | 250 |
IWSNGEDIAL LNALKAFPKE AAMRWEKIAA AVPGKSKAAC MKRVTELKKG | 300 |
FRSSKTPAN | 350 |
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