fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G46590 ANAC096 NAC domain containing protein 96 (.1)

>AT5G46590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 658
HindIII A|AGCTT 780
StyI C|C[AT][AT]GG 142
XhoI C|TCGAG 91


Click here to view TAIR data

>AT5G46590.1 length:879
ATGGGAAGTT CATGTTTACC TCCAGGGTTC CGGTTTCATC CTACGGATGA 
50
AGAACTCATC GAATATTACT TGAAAAGAAA AGTCGAAGGT CTCGAGATTG 
100
AGCTTGAAGT CATTCCCGTC ATCGATCTTT ATAGTTTCGA TCCTTGGGAG 
150
TTACCAGACA AGTCGTTTCT CCCAAACCGG GACATGGAAT GGTACTTCTT 
200
CTGCTCAAGG GACAAAAAAT ATCCTAATGG TTTTCGTACA AATCGAGGAA 
250
CAAAGGCTGG TTATTGGAAA GCAACCGGAA AAGATCGAAA AATTACTTCT 
300
CGTTCATCTT CTATAATTGG TTATAGAAAA ACTCTAGTTT TCTACAAAGG 
350
CCGTGCCCCG TTAGGCGATA GAAGCAATTG GATCATGCAT GAATATCGAC 
400
TATGCGATGA TGATACATCA CAAGGATCAC AAAATTTAAA GGGAGCTTTT 
450
GTGTTATGTC GTGTTGCTAT GAAGAATGAG ATCAAAACTA ATACGAAAAT 
500
CCGAAAAATT CCAAGCGAGC AAACAATCGG ATCAGGAGAA AGCTCGGGTT 
550
TATCAAGCCG AGTAACGTCT CCTAGTCGCG ATGAAACAAT GCCGTTTCAC 
600
TCATTTGCCA ATCCTGTATC TACTGAAACT GATTCTTCCA ACATTTGGAT 
650
TTCACCTGAA TTCATCCTCG ATTCTTCAAA GGACTATCCT CAAATCCAAG 
700
ATGTCGCATC TCAGTGCTTC CAACAAGACT TTGATTTTCC GATCATCGGT 
750
AACCAAAACA TGGAGTTTCC AGCGAGTACA AGCTTAGATC AGAACATGGA 
800
TGAGTTTATG CAAAACGGTT ATTGGACAAA TTATGGATAC GATCAAACCG 
850
GTTTATTCGG TTACTCAGAT TTCTCCTAG
900

>AT5G46590.1 longest ORF length:292
MGSSCLPPGF RFHPTDEELI EYYLKRKVEG LEIELEVIPV IDLYSFDPWE 
50
LPDKSFLPNR DMEWYFFCSR DKKYPNGFRT NRGTKAGYWK ATGKDRKITS 
100
RSSSIIGYRK TLVFYKGRAP LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF 
150
VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE SSGLSSRVTS PSRDETMPFH 
200
SFANPVSTET DSSNIWISPE FILDSSKDYP QIQDVASQCF QQDFDFPIIG 
250
NQNMEFPAST SLDQNMDEFM QNGYWTNYGY DQTGLFGYSD FS
300