fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G46760 bHLH005, ATR2, MYC3 Basic helix-loop-helix (bHLH) DNA-binding family protein (.1)

>AT5G46760.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 221, 675
EcoRI G|AATTC 864
HindIII A|AGCTT 68, 170, 471, 740, 901, 1337
HpaI GTT|AAC 478, 691
PstI CTGCA|G 1390
PvuII CAG|CTG 1112


Click here to view TAIR data

>AT5G46760.1 length:1779
ATGAACGGCA CAACATCATC AATCAACTTC TTGACCTCCG ACGATGACGC 
50
GTCGGCGGCG GCTATGGAAG CTTTCATTGG AACAAACCAC CACTCATCTC 
100
TCTTTCCTCC ACCACCACAA CAACCACCTC AGCCTCAGTT CAACGAAGAT 
150
ACTCTTCAAC AACGTCTCCA AGCTTTAATA GAATCCGCCG GAGAAAACTG 
200
GACTTACGCT ATCTTCTGGC AGATCTCACA CGACTTCGAT TCATCCACCG 
250
GAGATAACAC AGTGATCCTC GGCTGGGGAG ATGGTTACTA CAAAGGAGAG 
300
GAAGATAAAG AGAAGAAGAA GAACAACACC AACACGGCGG AGCAAGAGCA 
350
TCGGAAAAGA GTAATACGTG AGCTTAACTC GTTAATCTCC GGCGGAATTG 
400
GGGTTTCCGA TGAATCAAAC GATGAAGAAG TAACAGATAC TGAATGGTTC 
450
TTCTTAGTTT CGATGACTCA AAGCTTCGTT AACGGTGTTG GTCTCCCCGG 
500
AGAATCTTTC TTAAACTCTC GTGTGATTTG GTTATCCGGG TCTGGTGCTT 
550
TAACCGGGTC GGGTTGTGAA AGAGCGGGTC AAGGTCAGAT TTACGGGTTA 
600
AAGACGATGG TGTGTATCGC GACTCAAAAC GGCGTCGTTG AGCTTGGTTC 
650
GTCGGAGGTT ATAAGTCAAA GCTCAGATCT GATGCATAAA GTTAACAACT 
700
TGTTTAATTT CAACAACGGT GGTGGAAACA ATGGTGTTGA AGCTTCTTCG 
750
TGGGGTTTTA ATCTGAATCC AGATCAAGGA GAGAATGATC CAGCTTTGTG 
800
GATTAGTGAA CCGACGAACA CCGGAATCGA ATCTCCGGCG AGGGTTAATA 
850
ATGGTAATAA CTCGAATTCT AATTCTAAGT CTGATTCTCA TCAAATTTCT 
900
AAGCTTGAGA AGAATGATAT TAGCTCTGTA GAGAATCAGA ATCGTCAAAG 
950
TTCGTGTCTT GTCGAGAAAG ATTTGACCTT TCAAGGTGGG TTGTTGAAAT 
1000
CTAATGAGAC TTTGAGTTTC TGTGGTAATG AGAGTAGTAA GAAGAGAACT 
1050
TCGGTATCTA AAGGGAGTAA TAATGATGAA GGGATGCTTT CGTTTAGTAC 
1100
TGTGGTTAGA TCAGCTGCGA ATGATTCGGA TCATTCTGAT CTTGAAGCAT 
1150
CTGTTGTTAA GGAAGCGATT GTTGTTGAGC CACCGGAGAA GAAGCCGAGG 
1200
AAACGGGGGA GGAAACCGGC GAATGGGAGA GAAGAGCCGT TGAATCATGT 
1250
TGAAGCAGAG AGGCAGAGAA GAGAGAAGTT AAACCAGAGA TTCTACTCTT 
1300
TGAGAGCTGT TGTTCCTAAC GTTTCGAAGA TGGATAAAGC TTCGCTTCTC 
1350
GGAGACGCGA TTTCGTATAT CAATGAGCTT AAGTCGAAGC TGCAGCAAGC 
1400
GGAGTCTGAT AAAGAGGAGA TTCAGAAGAA GCTAGATGGG ATGAGTAAGG 
1450
AAGGGAATAA TGGGAAAGGT TGCGGGTCAA GGGCAAAAGA ACGGAAAAGT 
1500
TCGAATCAAG ATTCTACGGC GAGTTCTATA GAAATGGAGA TTGATGTTAA 
1550
GATCATAGGT TGGGATGTGA TGATACGTGT ACAATGCGGC AAGAAAGATC 
1600
ATCCCGGTGC TAGGTTCATG GAAGCACTTA AGGAATTGGA TTTGGAAGTG 
1650
AATCATGCGA GTTTATCCGT TGTGAATGAT TTGATGATTC AACAAGCTAC 
1700
GGTGAAGATG GGGAGCCAAT TTTTCAATCA TGACCAGCTC AAAGTTGCTT 
1750
TGATGACGAA AGTCGGAGAA AACTATTGA
1800

>AT5G46760.1 longest ORF length:592
MNGTTSSINF LTSDDDASAA AMEAFIGTNH HSSLFPPPPQ QPPQPQFNED 
50
TLQQRLQALI ESAGENWTYA IFWQISHDFD SSTGDNTVIL GWGDGYYKGE 
100
EDKEKKKNNT NTAEQEHRKR VIRELNSLIS GGIGVSDESN DEEVTDTEWF 
150
FLVSMTQSFV NGVGLPGESF LNSRVIWLSG SGALTGSGCE RAGQGQIYGL 
200
KTMVCIATQN GVVELGSSEV ISQSSDLMHK VNNLFNFNNG GGNNGVEASS 
250
WGFNLNPDQG ENDPALWISE PTNTGIESPA RVNNGNNSNS NSKSDSHQIS 
300
KLEKNDISSV ENQNRQSSCL VEKDLTFQGG LLKSNETLSF CGNESSKKRT 
350
SVSKGSNNDE GMLSFSTVVR SAANDSDHSD LEASVVKEAI VVEPPEKKPR 
400
KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYSLRAVVPN VSKMDKASLL 
450
GDAISYINEL KSKLQQAESD KEEIQKKLDG MSKEGNNGKG CGSRAKERKS 
500
SNQDSTASSI EMEIDVKIIG WDVMIRVQCG KKDHPGARFM EALKELDLEV 
550
NHASLSVVND LMIQQATVKM GSQFFNHDQL KVALMTKVGE NY
600