Locus |
Common name |
Short description |
AT5G46915 |
|
transcriptional factor B3 family protein (.1) |
>AT5G46915.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
602 |
EcoRI
| G|AATTC |
559 |
EcoRV
| GAT|ATC |
20 |
HindIII
| A|AGCTT |
54, 171 |
PvuII
| CAG|CTG |
428, 470 |
Click here to view TAIR data
>AT5G46915.1 length:867
ATGGCTACTA CGAACCCTGG ATATCTTCGG TGCAAAGAAG AAAGGAATAA | 50 |
CAAAAGCTTC TTCATGGTGC TTCAAAGTGT TGATGTTTCT TCAGAGAACT | 100 |
TGGTTGAATC TTGTCGTTAT ATGACAATGG GTCTTGCCGT AAAGCGGGCA | 150 |
CTTCCTTATG ACTTTGTGAG AAGCTTCACG GACAAAGAGC TTTCCTTAGG | 200 |
AATCTCCAAA AACCCGACAT TTTACTACAT GGAGAAGTCT GGATGGGAGA | 250 |
AGTTTGTGAG GGACAACACT TTGGGAACCC TTGATGGGAA GGAGATGATG | 300 |
CAACCTCCAC AACCTAGAGC CTTCTTGGCA TCTTCAAGTC GTATTAGAAG | 350 |
ATTCAGAACA GAACAAGGGG AAGATGACAA GAAGGAAGAG GTGGTGTCTG | 400 |
AGTCAAGTAA TCGTGGCCGG ACAACCGCAG CTGAATCTGT TGGAAGGAAG | 450 |
CTCAAACTTG GGAAGAAGGC AGCTGAGGAA TCCCAAGAAT CTAAAAGGAC | 500 |
CGAGAAAGTG GTTAGAGCCC GAAGAGATGA GGCAGGTGCC TCTTCATCTA | 550 |
CTGCTGTAGA ATTCACGGCC GTATTCCAGC CAGCATATCT CTACAATCTG | 600 |
AGGATCCGAA GTTCTGTTAA GGATCAAATG CCGGTTGAGA AAACAATATT | 650 |
CAAAGTCCAT CATCCAAATG GGAAGAAATT TTGGAATGTG GTGTATCTGG | 700 |
GGAGTTATGG AGCTTTCTCT GGTGGATGGC AATGTTTGGT TAAAGAGTAT | 750 |
CCCCTTGTTG TTGGGGATAT ATACCTGCAA GTTTACATTC ATCAAACCGG | 800 |
AGGAGCTACT TCTAGTTGTC TCCAAACCCT AATGATGATG GATGTGAGGG | 850 |
TGAGAAGAAA TTACTGA | 900 |
>AT5G46915.1 longest ORF length:288
MATTNPGYLR CKEERNNKSF FMVLQSVDVS SENLVESCRY MTMGLAVKRA | 50 |
LPYDFVRSFT DKELSLGISK NPTFYYMEKS GWEKFVRDNT LGTLDGKEMM | 100 |
QPPQPRAFLA SSSRIRRFRT EQGEDDKKEE VVSESSNRGR TTAAESVGRK | 150 |
LKLGKKAAEE SQESKRTEKV VRARRDEAGA SSSTAVEFTA VFQPAYLYNL | 200 |
RIRSSVKDQM PVEKTIFKVH HPNGKKFWNV VYLGSYGAFS GGWQCLVKEY | 250 |
PLVVGDIYLQ VYIHQTGGAT SSCLQTLMMM DVRVRRNY | 300 |
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