fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G46915 transcriptional factor B3 family protein (.1)

>AT5G46915.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 602
EcoRI G|AATTC 559
EcoRV GAT|ATC 20
HindIII A|AGCTT 54, 171
PvuII CAG|CTG 428, 470


Click here to view TAIR data

>AT5G46915.1 length:867
ATGGCTACTA CGAACCCTGG ATATCTTCGG TGCAAAGAAG AAAGGAATAA 
50
CAAAAGCTTC TTCATGGTGC TTCAAAGTGT TGATGTTTCT TCAGAGAACT 
100
TGGTTGAATC TTGTCGTTAT ATGACAATGG GTCTTGCCGT AAAGCGGGCA 
150
CTTCCTTATG ACTTTGTGAG AAGCTTCACG GACAAAGAGC TTTCCTTAGG 
200
AATCTCCAAA AACCCGACAT TTTACTACAT GGAGAAGTCT GGATGGGAGA 
250
AGTTTGTGAG GGACAACACT TTGGGAACCC TTGATGGGAA GGAGATGATG 
300
CAACCTCCAC AACCTAGAGC CTTCTTGGCA TCTTCAAGTC GTATTAGAAG 
350
ATTCAGAACA GAACAAGGGG AAGATGACAA GAAGGAAGAG GTGGTGTCTG 
400
AGTCAAGTAA TCGTGGCCGG ACAACCGCAG CTGAATCTGT TGGAAGGAAG 
450
CTCAAACTTG GGAAGAAGGC AGCTGAGGAA TCCCAAGAAT CTAAAAGGAC 
500
CGAGAAAGTG GTTAGAGCCC GAAGAGATGA GGCAGGTGCC TCTTCATCTA 
550
CTGCTGTAGA ATTCACGGCC GTATTCCAGC CAGCATATCT CTACAATCTG 
600
AGGATCCGAA GTTCTGTTAA GGATCAAATG CCGGTTGAGA AAACAATATT 
650
CAAAGTCCAT CATCCAAATG GGAAGAAATT TTGGAATGTG GTGTATCTGG 
700
GGAGTTATGG AGCTTTCTCT GGTGGATGGC AATGTTTGGT TAAAGAGTAT 
750
CCCCTTGTTG TTGGGGATAT ATACCTGCAA GTTTACATTC ATCAAACCGG 
800
AGGAGCTACT TCTAGTTGTC TCCAAACCCT AATGATGATG GATGTGAGGG 
850
TGAGAAGAAA TTACTGA
900

>AT5G46915.1 longest ORF length:288
MATTNPGYLR CKEERNNKSF FMVLQSVDVS SENLVESCRY MTMGLAVKRA 
50
LPYDFVRSFT DKELSLGISK NPTFYYMEKS GWEKFVRDNT LGTLDGKEMM 
100
QPPQPRAFLA SSSRIRRFRT EQGEDDKKEE VVSESSNRGR TTAAESVGRK 
150
LKLGKKAAEE SQESKRTEKV VRARRDEAGA SSSTAVEFTA VFQPAYLYNL 
200
RIRSSVKDQM PVEKTIFKVH HPNGKKFWNV VYLGSYGAFS GGWQCLVKEY 
250
PLVVGDIYLQ VYIHQTGGAT SSCLQTLMMM DVRVRRNY
300