fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G47220 ATERF-2, ERF2, ATERF2 ETHYLENE RESPONSE FACTOR- 2, ethylene responsive element binding factor 2 (.1)

>AT5G47220.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 571


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>AT5G47220.1 length:732
ATGTACGGAC AGTGCAATAT AGAATCCGAC TACGCTTTGT TGGAGTCGAT 
50
AACACGTCAC TTGCTAGGAG GAGGAGGAGA GAACGAGCTG CGACTCAATG 
100
AGTCAACACC GAGTTCGTGT TTCACAGAGA GTTGGGGAGG TTTGCCATTG 
150
AAAGAGAATG ATTCAGAGGA CATGTTGGTG TACGGACTCC TCAAAGATGC 
200
CTTCCATTTT GACACGTCAT CATCGGACTT GAGCTGTCTT TTTGATTTTC 
250
CGGCGGTTAA AGTCGAGCCA ACTGAGAACT TTACGGCGAT GGAGGAGAAA 
300
CCAAAGAAAG CGATACCGGT TACGGAGACG GCAGTGAAGG CGAAGCATTA 
350
CAGAGGAGTG AGGCAGAGAC CGTGGGGGAA ATTCGCGGCG GAGATACGTG 
400
ATCCGGCGAA GAATGGAGCT AGGGTTTGGT TAGGGACGTT TGAGACGGCG 
450
GAAGATGCGG CTTTAGCTTA CGATATAGCT GCTTTTAGGA TGCGTGGTTC 
500
CCGCGCTTTA TTGAATTTTC CGTTGAGGGT TAATTCCGGT GAACCTGACC 
550
CGGTTCGGAT CACGTCTAAG AGATCTTCTT CGTCGTCGTC GTCGTCGTCC 
600
TCTTCTACGT CGTCGTCTGA AAACGGGAAG TTGAAACGAA GGAGAAAAGC 
650
AGAGAATCTG ACGTCGGAGG TGGTGCAGGT GAAGTGTGAG GTTGGTGATG 
700
AGACACGTGT TGATGAGTTA TTGGTTTCAT AA
750

>AT5G47220.1 longest ORF length:243
MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL 
50
KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK 
100
PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA 
150
EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS 
200
SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
250