fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G47230 ATERF5, ATERF-5, ERF5 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ethylene responsive element binding factor 5 (.1)

>AT5G47230.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 229
HpaI GTT|AAC 757
NcoI C|CATGG 82
PvuII CAG|CTG 407
StyI C|C[AT][AT]GG 82


Click here to view TAIR data

>AT5G47230.1 length:903
ATGGCGACTC CTAACGAAGT ATCTGCACTT TGGTTCATCG AGAAACATCT 
50
ACTCGACGAG GCTTCTCCTG TGGCTACAGA TCCATGGATG AAGCACGAAT 
100
CATCATCAGC AACAGAATCT AGCTCTGACT CTTCTTCTAT CATCTTCGGA 
150
TCATCGTCCT CTTCTTTCGC CCCAATTGAT TTCTCTGAAT CCGTATGCAA 
200
ACCTGAAATC ATCGATCTCG ATACTCCCAG ATCTATGGAA TTTCTATCGA 
250
TTCCATTTGA ATTTGACTCA GAAGTTTCTG TTTCTGATTT CGATTTTAAA 
300
CCTTCTAATC AAAATCAAAA TCAGTTTGAA CCGGAGCTTA AATCTCAAAT 
350
TCGTAAACCG CCATTGAAGA TTTCGCTTCC AGCTAAAACA GAGTGGATTC 
400
AATTCGCAGC TGAAAACACC AAACCGGAAG TTACTAAACC GGTTTCGGAA 
450
GAAGAGAAGA AGCATTACAG AGGAGTAAGA CAAAGACCGT GGGGGAAATT 
500
CGCGGCGGAG ATTCGTGACC CGAATAAACG CGGATCTCGC GTTTGGCTTG 
550
GGACGTTTGA TACAGCGATT GAAGCGGCTA GAGCTTATGA CGAAGCAGCG 
600
TTTAGACTAC GAGGATCGAA AGCGATTTTG AATTTCCCTC TTGAAGTTGG 
650
GAAGTGGAAA CCACGCGCCG ATGAAGGTGA GAAGAAACGG AAGAGAGACG 
700
ATGATGAGAA AGTGACTGTG GTTGAGAAAG TGTTGAAGAC GGAACAGAGC 
750
GTTGACGTTA ACGGTGGAGA GACGTTTCCG TTTGTAACGT CGAATTTAAC 
800
GGAATTATGT GACTGGGATT TAACGGGGTT TCTTAACTTT CCGCTTCTGT 
850
CGCCGTTATC TCCTCATCCA CCGTTTGGTT ATTCCCAGTT GACCGTTGTT 
900
TGA
950

>AT5G47230.1 longest ORF length:300
MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG 
50
SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK 
100
PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE 
150
EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA 
200
FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS 
250
VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV 
300