fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G47390 myb-like transcription factor family protein (.1)

>AT5G47390.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 289, 506
NheI G|CTAGC 403
StyI C|C[AT][AT]GG 289, 506


Click here to view TAIR data

>AT5G47390.1 length:1098
ATGACTCGTC GATGTTCTCA CTGCAATCAC AATGGCCACA ACTCTCGGAC 
50
TTGTCCCAAT CGCGGCGTGA AGCTCTTTGG TGTTCGGCTC ACCGAAGGTT 
100
CGATCCGGAA AAGTGCAAGT ATGGGTAATC TTAGCCATTA CACGGGTTCT 
150
GGATCGGGTG GGCATGGAAC CGGGTCCAAC ACTCCGGGTT CTCCGGGTGA 
200
TGTCCCTGAC CATGTCGCTG GTGATGGTTA CGCTTCTGAG GATTTCGTTG 
250
CTGGCTCTTC CTCTAGCCGC GAGAGAAAGA AAGGAACTCC ATGGACAGAG 
300
GAAGAACACA GGATGTTCTT ATTAGGTTTA CAGAAGCTGG GTAAAGGTGA 
350
TTGGAGAGGT ATCTCAAGAA ACTATGTGAC CACTAGGACA CCTACACAAG 
400
TTGCTAGCCA TGCTCAGAAG TATTTCATCA GACAATCCAA TGTCTCTCGT 
450
CGCAAAAGAC GTTCTAGTCT CTTTGATATG GTTCCTGATG AGGTTGGAGA 
500
TATTCCCATG GATTTGCAAG AACCAGAGGA AGATAATATT CCTGTGGAAA 
550
CTGAAATGCA AGGTGCTGAC TCTATTCATC AGACACTTGC TCCTAGCTCA 
600
CTTCACGCAC CGTCAATCTT GGAAATCGAA GAATGTGAAT CAATGGACTC 
650
CACAAACTCT ACCACCGGGG AACCAACCGC AACTGCCGCT GCTGCTTCTT 
700
CTTCTTCCAG ACTAGAAGAA ACCACACAAC TGCAATCACA ACTGCAACCG 
750
CAGCCGCAAC TACCTGGCTC ATTCCCCATA CTATATCCGA CCTACTTTTC 
800
ACCATATTAC CCGTTTCCAT TCCCAATATG GCCTGCTGGT TATGTTCCTG 
850
AACCACCCAA GAAAGAGGAA ACTCATGAAA TTCTCAGACC AACTGCTGTG 
900
CACTCGAAAG CTCCTATCAA TGTTGACGAG CTTCTTGGTA TGTCTAAGCT 
950
CAGCCTTGCA GAGTCCAACA AACATGGAGA ATCCGATCAG TCTCTTTCAT 
1000
TGAAGCTAGG TGGCGGGTCA TCTTCAAGAC AATCAGCATT TCACCCGAAT 
1050
CCTAGCTCTG ATAGTTCAGA CATCAAAAGC GTGATACACG CTTTATAA
1100

>AT5G47390.1 longest ORF length:365
MTRRCSHCNH NGHNSRTCPN RGVKLFGVRL TEGSIRKSAS MGNLSHYTGS 
50
GSGGHGTGSN TPGSPGDVPD HVAGDGYASE DFVAGSSSSR ERKKGTPWTE 
100
EEHRMFLLGL QKLGKGDWRG ISRNYVTTRT PTQVASHAQK YFIRQSNVSR 
150
RKRRSSLFDM VPDEVGDIPM DLQEPEEDNI PVETEMQGAD SIHQTLAPSS 
200
LHAPSILEIE ECESMDSTNS TTGEPTATAA AASSSSRLEE TTQLQSQLQP 
250
QPQLPGSFPI LYPTYFSPYY PFPFPIWPAG YVPEPPKKEE THEILRPTAV 
300
HSKAPINVDE LLGMSKLSLA ESNKHGESDQ SLSLKLGGGS SSRQSAFHPN 
350
PSSDSSDIKS VIHAL
400