Locus |
Common name |
Short description |
AT5G47670 |
NF-YB6, L1L |
"nuclear factor Y, subunit B6", LEC1-LIKE, nuclear factor Y, subunit B6 (.1.2) |
>AT5G47670.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
155 |
EcoRI
| G|AATTC |
28 |
PstI
| CTGCA|G |
378 |
StyI
| C|C[AT][AT]GG |
170 |
Click here to view TAIR data
>AT5G47670.2 length:618
ATGGCAGAGG GCAGTATGCG TCCTCCAGAA TTCAACCAGC CTAACAAAAC | 50 |
CAGTAATGGT GGTGAGGAGG AGTGCACGGT GAGGGAGCAA GACAGGTTCA | 100 |
TGCCTATTGC CAACGTGATA CGGATCATGC GGAGGATCTT ACCTGCTCAC | 150 |
GCCAAGATCT CAGATGACTC CAAGGAGACG ATCCAAGAGT GTGTTTCGGA | 200 |
GTACATCAGC TTCATAACAG GGGAGGCTAA TGAGCGGTGC CAGCGGGAAC | 250 |
AGCGCAAGAC CATCACTGCT GAGGACGTCT TGTGGGCAAT GAGCAAGCTC | 300 |
GGTTTTGATG ACTACATCGA ACCCCTCACG TTGTACCTCC ACCGCTACAG | 350 |
AGAGTTGGAA GGTGAAAGAG GGGTTAGCTG CAGTGCTGGG TCCGTTAGTA | 400 |
TGACCAACGG CTTGGTGGTC AAGAGGCCTA ATGGGACCAT GACCGAGTAT | 450 |
GGAGCCTACG GGCCTGTGCC AGGGATTCAC ATGGCGCAGT ACCATTATCG | 500 |
TCATCAGAAC GGGTTTGTTT TCAGTGGTAA CGAACCTAAT TCTAAGATGA | 550 |
GTGGTTCATC TTCAGGAGCA AGTGGCGCCA GAGTTGAAGT ATTTCCGACT | 600 |
CAACAACATA AGTACTGA | 650 |
>AT5G47670.2 longest ORF length:205
MAEGSMRPPE FNQPNKTSNG GEEECTVREQ DRFMPIANVI RIMRRILPAH | 50 |
AKISDDSKET IQECVSEYIS FITGEANERC QREQRKTITA EDVLWAMSKL | 100 |
GFDDYIEPLT LYLHRYRELE GERGVSCSAG SVSMTNGLVV KRPNGTMTEY | 150 |
GAYGPVPGIH MAQYHYRHQN GFVFSGNEPN SKMSGSSSGA SGARVEVFPT | 200 |
QQHKY | 250 |
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