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| Locus | Common name | Short description |
| AT5G47790 | SMAD/FHA domain-containing protein (.1) |
>AT5G47790.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 10 |
| HindIII | A|AGCTT | 541 |
| PvuII | CAG|CTG | 530, 1046 |
| StyI | C|C[AT][AT]GG | 1004 |
| XbaI | T|CTAGA | 243 |
Click here to view TAIR data
>AT5G47790.1 length:1110
ATGTATGGAA GATCTGGTCT TGACAGGTTT AAGAAGTCCC AAACTTCGGA | 50 |
ACCCTTCTCT GTATCAGCAA ATCCTCCTCC GGTGGTACAA CAACATCTGT | 100 |
CTCCGGAGGC ATTGTCGGGG CAAAAAACTC AGATTGGAGC TGGTCAATCA | 150 |
AACTGGCATC CCCCTGATTG GGCGATTGAG CCTCGTGCCG GTGTCTACTC | 200 |
TCTGGAAGTT GTGAAAGACG GCCAGATCCT TGATCGGATT CATCTAGATA | 250 |
GACGAAGGCA TATCTTCGGG AGACAACATC AGACTTGTGA TTTTGTCCTT | 300 |
GATCATCAGT CTGTTTCCCG CCAGCATGCC GCAGTTGTTC CTCACAAGAA | 350 |
TGGCAGCATC TTTGTGATTG ACTTGGGATC AGCTCATGGT ACGTTTGTTG | 400 |
CAAATGAGAG GTTGACTAAA GATACTCCTG TAGAGCTTGA AGTGGGTCAA | 450 |
TCCTTACGAT TTGCTGCCTC CACAAGAATC TACCTTCTGA GAAAGAACAG | 500 |
TGAGGCTCTC TTTTCTCGCC CTCCACCTCC AGCTGAGATT AAGCTTCCTC | 550 |
CACCTCCTGA TGCTTCTGAT GAGGAAGCTG TTGTTGCTTA CAATACCTTG | 600 |
CTGAATCGAT ATGGTTTAAG CAATGGAGAA TCTGGTGGTA TGTTAGGGAA | 650 |
AAGGAAAGAG AAGACCGGAT CAGAAGCGGG AGTGGCTAAG AGGATGAAGA | 700 |
AAGTGAGAGT GAGCTTCAGG GATCAACTAG GAGGAGAGCT GGCTGAGATT | 750 |
GTTGGCATGT CTGATGGAGC AGACGTGGAA ACAGAGCCTG GTCCTATAAA | 800 |
TGTCAAAGAA GGAAGCCTCG TTGGGAAATA TGAATCACTG GTGCGAGTGA | 850 |
CACTCATACC CAAAGGCAAA GTGAAGGAAG AGAAAGCCTT TACAGGAGGA | 900 |
ACAAGAGGAG GTGTAACAGA TCGACTCCAG GAAGCTATGA ATATGTTGAA | 950 |
ACGGGGTCCA AAAACAGGGA TTTACGATGA CCTTTACGGT GGTGACTCAC | 1000 |
TTGCCAAGGC TGTTGGTACG TCATGGGCTT CTGTGAGTCA ACCAGCAGCT | 1050 |
GAAACTGAAT GTGGAGGGGT TGGTGAAGAA GATGATAACG ACGATCTGTT | 1100 |
TGGTGACTAA | 1150 |
>AT5G47790.1 longest ORF length:369
MYGRSGLDRF KKSQTSEPFS VSANPPPVVQ QHLSPEALSG QKTQIGAGQS | 50 |
NWHPPDWAIE PRAGVYSLEV VKDGQILDRI HLDRRRHIFG RQHQTCDFVL | 100 |
DHQSVSRQHA AVVPHKNGSI FVIDLGSAHG TFVANERLTK DTPVELEVGQ | 150 |
SLRFAASTRI YLLRKNSEAL FSRPPPPAEI KLPPPPDASD EEAVVAYNTL | 200 |
LNRYGLSNGE SGGMLGKRKE KTGSEAGVAK RMKKVRVSFR DQLGGELAEI | 250 |
VGMSDGADVE TEPGPINVKE GSLVGKYESL VRVTLIPKGK VKEEKAFTGG | 300 |
TRGGVTDRLQ EAMNMLKRGP KTGIYDDLYG GDSLAKAVGT SWASVSQPAA | 350 |
ETECGGVGEE DDNDDLFGD | 400 |