Locus |
Common name |
Short description |
AT5G48890 |
LATE |
LATE FLOWERING, C2H2-like zinc finger protein (.1) |
>AT5G48890.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
StyI
| C|C[AT][AT]GG |
147, 396 |
XbaI
| T|CTAGA |
121 |
Click here to view TAIR data
>AT5G48890.1 length:522
ATGGAAGATC ATTACCATCA AGTAGAAGTG GAGGGAGAAG AAGAGATCAA | 50 |
GCCAAGCAAA GAAGCCAACA AGACAGACGA AAACACATCA TCATTAAGAA | 100 |
TATTCCCCTG CCTCTTTTGT TCTAGAAAGT TCCATAGCTC CCAAGCCCTA | 150 |
GGAGGCCACC AGAACGCCCA CAAGAAGGAG CGAACCGCTG CTAGAAGAGC | 200 |
CAAAAGGGCT TATGATTTTG TCAACAACAA TGACTTCCTT CACACGTTAC | 250 |
CTGTTTTCTT ATCCTCTCCC TCTCAACATC ACTTGACCAT CTTAGGCTAC | 300 |
CCTGCTTCTG CCTCCGTTGC CTGTTTTCCG ACGGTTCATC CCGACCATCC | 350 |
GATTTTCAAA TCCAGTGGTT CTCATGTCGT GTTGGCTACA TCCCACCAAG | 400 |
GTAGAGATTG CAAAGGAGGG TACTGTTGTC AACAACGTGT AGACATTTTG | 450 |
GATCATCATT ATAACGTGGT CAATAGTGAC AAGGGTAAAG ATCAGTGTCT | 500 |
TGATCTCTCC CTACATTTGT GA | 550 |
>AT5G48890.1 longest ORF length:173
MEDHYHQVEV EGEEEIKPSK EANKTDENTS SLRIFPCLFC SRKFHSSQAL | 50 |
GGHQNAHKKE RTAARRAKRA YDFVNNNDFL HTLPVFLSSP SQHHLTILGY | 100 |
PASASVACFP TVHPDHPIFK SSGSHVVLAT SHQGRDCKGG YCCQQRVDIL | 150 |
DHHYNVVNSD KGKDQCLDLS LHL | 200 |
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