Locus |
Common name |
Short description |
AT5G49240 |
APRR4 |
pseudo-response regulator 4 (.1) |
>AT5G49240.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
444 |
Click here to view TAIR data
>AT5G49240.1 length:879
ATGCAGCCAT TAAATATGGC TGAGATATTG GATCACCGTG GAGTCTTGAC | 50 |
CGACGGTGAT GATGGTCCAT TTAGAAATCT AACAAACTTC TATGATATGT | 100 |
TTTCAAGCAA CTTTCCTGAA GGTTTGCGAG TGTTAGTCTT CGATGAAGAT | 150 |
CCATCGTATC TTCTGATATT GGAGAGACAT CTCCAAAAGT TTCAATACCA | 200 |
AGTGACTATA TGCAACGAAG TGAACAAAGC TATGCATACA CTCCGCAACC | 250 |
ATAGGAATAG GTTCGACCTC GCTATGATAC AAGTAAATAA TGCAGAAGGT | 300 |
GATATATTCC GGTTTCTCTC GGAAATCGGA TCGGAAATGG ATCTTCCAAT | 350 |
CATCATAATA TCTGAAGACG ATTCAGTGAA GTCGGTGAAG AAATGGATGA | 400 |
TTAACGGTGC TGCCGACTAT CTTATAAAAC CGATAAGACC CGAAGATCTA | 450 |
CGGATAGTAT TCAAACATTT GGTAAAGAAG ATGAGAGAAA GGAGGAGTGT | 500 |
GGTGACCGGA GAGGCAGAGA AAGCAGCAGG TGAGAAATCA TCCTCTGTCG | 550 |
GAGATTCCAC CATAAGAAAC CCTAACAAGA GTAAAAGAAG TAGTTGCCTT | 600 |
GAAGCAGAAG TCAACGAGGA GGATCGTCAT GATCATAATG ATCGTGCTTG | 650 |
TGCTTCTAGT GCCAAGAAAA GACGAGTCGT TTGGGACGAG GAGCTTCACC | 700 |
AAAACTTTCT CAACGCCGTG GATTTTCTTG GACTCGAAAG AGCTGTTCCC | 750 |
AAAAAAATAT TAGATGTTAT GAAGGTTGAT TACATCAGTC GAGAAAACGT | 800 |
AGCCAGTCAT CTTCAGGTAA CGTTTCTTAT ATACAACATA ATTGTTCATT | 850 |
TTCAACAACA TTTTTGCTTT TATTCTTGA | 900 |
>AT5G49240.1 longest ORF length:292
MQPLNMAEIL DHRGVLTDGD DGPFRNLTNF YDMFSSNFPE GLRVLVFDED | 50 |
PSYLLILERH LQKFQYQVTI CNEVNKAMHT LRNHRNRFDL AMIQVNNAEG | 100 |
DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL | 150 |
RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL | 200 |
EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP | 250 |
KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS | 300 |
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