fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G49240 APRR4 pseudo-response regulator 4 (.1)

>AT5G49240.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 444


Click here to view TAIR data

>AT5G49240.1 length:879
ATGCAGCCAT TAAATATGGC TGAGATATTG GATCACCGTG GAGTCTTGAC 
50
CGACGGTGAT GATGGTCCAT TTAGAAATCT AACAAACTTC TATGATATGT 
100
TTTCAAGCAA CTTTCCTGAA GGTTTGCGAG TGTTAGTCTT CGATGAAGAT 
150
CCATCGTATC TTCTGATATT GGAGAGACAT CTCCAAAAGT TTCAATACCA 
200
AGTGACTATA TGCAACGAAG TGAACAAAGC TATGCATACA CTCCGCAACC 
250
ATAGGAATAG GTTCGACCTC GCTATGATAC AAGTAAATAA TGCAGAAGGT 
300
GATATATTCC GGTTTCTCTC GGAAATCGGA TCGGAAATGG ATCTTCCAAT 
350
CATCATAATA TCTGAAGACG ATTCAGTGAA GTCGGTGAAG AAATGGATGA 
400
TTAACGGTGC TGCCGACTAT CTTATAAAAC CGATAAGACC CGAAGATCTA 
450
CGGATAGTAT TCAAACATTT GGTAAAGAAG ATGAGAGAAA GGAGGAGTGT 
500
GGTGACCGGA GAGGCAGAGA AAGCAGCAGG TGAGAAATCA TCCTCTGTCG 
550
GAGATTCCAC CATAAGAAAC CCTAACAAGA GTAAAAGAAG TAGTTGCCTT 
600
GAAGCAGAAG TCAACGAGGA GGATCGTCAT GATCATAATG ATCGTGCTTG 
650
TGCTTCTAGT GCCAAGAAAA GACGAGTCGT TTGGGACGAG GAGCTTCACC 
700
AAAACTTTCT CAACGCCGTG GATTTTCTTG GACTCGAAAG AGCTGTTCCC 
750
AAAAAAATAT TAGATGTTAT GAAGGTTGAT TACATCAGTC GAGAAAACGT 
800
AGCCAGTCAT CTTCAGGTAA CGTTTCTTAT ATACAACATA ATTGTTCATT 
850
TTCAACAACA TTTTTGCTTT TATTCTTGA
900

>AT5G49240.1 longest ORF length:292
MQPLNMAEIL DHRGVLTDGD DGPFRNLTNF YDMFSSNFPE GLRVLVFDED 
50
PSYLLILERH LQKFQYQVTI CNEVNKAMHT LRNHRNRFDL AMIQVNNAEG 
100
DIFRFLSEIG SEMDLPIIII SEDDSVKSVK KWMINGAADY LIKPIRPEDL 
150
RIVFKHLVKK MRERRSVVTG EAEKAAGEKS SSVGDSTIRN PNKSKRSSCL 
200
EAEVNEEDRH DHNDRACASS AKKRRVVWDE ELHQNFLNAV DFLGLERAVP 
250
KKILDVMKVD YISRENVASH LQVTFLIYNI IVHFQQHFCF YS
300