fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G49300 GATA16 GATA transcription factor 16 (.1)

>AT5G49300.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 352
HpaI GTT|AAC 91
SpeI A|CTAGT 85


Click here to view TAIR data

>AT5G49300.1 length:420
ATGCTAGATC ACAGTGAAAA GGTCTTATTG GTTGATTCAG AAACCATGAA 
50
AACAAGAGCT GAAGATATGA TCGAACAGAA CAACACTAGT GTTAACGACA 
100
AGAAGAAGAC TTGTGCTGAT TGTGGAACCA GTAAAACTCC TCTTTGGCGT 
150
GGTGGTCCTG TTGGTCCAAA GTCGTTGTGT AACGCGTGTG GGATCAGAAA 
200
CAGAAAGAAG AGAAGAGGAG GAACAGAAGA TAATAAGAAA TTAAAGAAAT 
250
CGAGTTCTGG CGGCGGAAAC CGTAAATTTG GTGAATCGTT AAAACAGAGT 
300
TTGATGGATT TGGGGATAAG GAAGAGATCA ACGGTGGAGA AGCAACGACA 
350
GAAGCTTGGT GAAGAAGAAC AAGCCGCTGT GTTACTCATG GCTCTTTCTT 
400
ATGGCTCTGT TTACGCTTAG 
450

>AT5G49300.1 longest ORF length:139
MLDHSEKVLL VDSETMKTRA EDMIEQNNTS VNDKKKTCAD CGTSKTPLWR 
50
GGPVGPKSLC NACGIRNRKK RRGGTEDNKK LKKSSSGGGN RKFGESLKQS 
100
LMDLGIRKRS TVEKQRQKLG EEEQAAVLLM ALSYGSVYA
150