fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G49450 ATBZIP1 basic leucine-zipper 1 (.1)

>AT5G49450.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 134
SalI G|TCGAC 331
XhoI C|TCGAG 252


Click here to view TAIR data

>AT5G49450.1 length:438
ATGGCAAACG CAGAGAAGAC AAGTTCAGGT TCCGACATAG ATGAGAAGAA 
50
AAGAAAACGC AAGTTATCAA ACCGCGAATC TGCAAGGAGG TCGCGTTTGA 
100
AGAAACAGAA GTTAATGGAA GACACGATTC ATGAGATCTC CAGTCTTGAA 
150
CGACGAATCA AAGAGAACAG TGAGAGATGT CGAGCTGTAA AACAGAGGCT 
200
TGACTCGGTC GAAACGGAGA ACGCGGGTCT TAGATCGGAG AAGATTTGGC 
250
TCTCGAGTTA CGTTAGCGAT TTAGAGAATA TGATTGCTAC GACGAGTTTA 
300
ACGCTGACGC AGAGTGGTGG TGGCGATTGT GTCGACGATC AGAACGCAAA 
350
CGCGGGAATA GCGGTTGGAG ATTGTAGACG TACACCGTGG AAATTGAGTT 
400
GTGGTTCTCT ACAACCAATG GCGTCCTTTA AGACATGA
450

>AT5G49450.1 longest ORF length:145
MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTIHEISSLE 
50
RRIKENSERC RAVKQRLDSV ETENAGLRSE KIWLSSYVSD LENMIATTSL 
100
TLTQSGGGDC VDDQNANAGI AVGDCRRTPW KLSCGSLQPM ASFKT
150