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| Locus | Common name | Short description |
| AT5G50080 | ERF110 | ethylene response factor 110 (.1) |
>AT5G50080.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, RsrII, SacI, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp45I, TspRI, Tth111I, XbaI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 151 |
| AccII(FnuDII) | CG|CG | 331 |
| AciI | C|CGC | 291, 330 |
| AluI | AG|CT | 265, 384, 445 |
| ApoI | Pu|AATTPy | 390 |
| AvaI | C|PyCGPuG | 307, 538 |
| AvaII | G|G[AT]CC | 615 |
| BfaI | C|TAG | 294, 336 |
| BsaAI | PyAC|GTPu | 275 |
| BsaJI | C|CNNGG | 8, 250, 332, 369 |
| BsaWI | [AT]|CCGG[AT] | 362 |
| BsiEI | CGPuPy|CG | 170 |
| BsiHKAI | G[AT]GC[AT]|C | 65 |
| BsoBI | C|PyCGPuG | 307, 538 |
| Bsp1286I | G[GAT]GC[CAT]|C | 65 |
| BspDI | AT|CGAT | 115 |
| BssSI | C|TCGTG | 146 |
| BstF5I | GGATGNN| | 104, 403 |
| BstUI | CG|CG | 331 |
| BstYI | Pu|GATCPy | 477 |
| BtgI | C|CPuPyGG | 8, 250, 332, 369 |
| Cac8I | GCN|NGC | 40 |
| ClaI | AT|CGAT | 115 |
| DdeI | C|TNAG | 46, 52, 268 |
| DpnI | GA-CH3|TC | 169, 278, 476 |
| DpnII | |GATC | 169, 278, 476 |
| Fnu4HI | GC|NGC | 264, 291, 330, 354 |
| HaeIII | GG|CC | 16, 328, 521 |
| HinfI | G|ANTC | 112, 117, 153, 177, 410 |
| HpaII | C|CGG | 361 |
| Hpy188I | TCN|GA | 47, 167, 479 |
| Hpy99I | CG[AT]CG| | 347 |
| HpyCH4III | ACN|GT | 453, 527 |
| HpyCH4IV | A|CGT | 274, 311 |
| HpyCH4V | TG|CA | 355, 510, 637 |
| MboI | |GATC | 169, 278, 476 |
| MspA1I | C[AC]G|C[GT]G | 266, 323, 332, 446 |
| MspI | C|CGG | 361 |
| MwoI | GCNNNNN|NNGC | 63, 330, 465 |
| NcoI | C|CATGG | 8, 250 |
| NlaIII | CATG| | 7, 181, 249 |
| NlaIV | GGN|NCC | 365 |
| PaeR7I | C|TCGAG | 538 |
| PvuI | CGAT|CG | 170 |
| PvuII | CAG|CTG | 266, 446 |
| RsaI | GT|AC | 226 |
| SacII | CCGC|GG | 332 |
| Sau3AI | |GATC | 169, 278, 476 |
| Sau96I | G|GNCC | 615 |
| SmlI | C|TPyPuAG | 538 |
| StyI | C|C[AT][AT]GG | 8, 250 |
| Taqƒ¿I | T|CGA | 114, 171, 537 |
| TfiI | G|A[AT]TC | 112, 117, 177, 410 |
| TliI | C|TCGAG | 538 |
| TseI | G|C[AT]GC | 264, 354 |
| Tsp509I | |AATT | 389, 485, 629 |
| XcmI | CCANNNNN|NNNNTGG | 259 |
| XhoI | C|TCGAG | 538 |
| XmnI | GAANN|NNTTC | 117 |
Click here to view TAIR data
>AT5G50080.1 length:663
ATGTCTGCCA TGGTCTCGGC CTTGACACAG GTGGTTTCTG CTCGCTCTCA | 50 |
GACTGAGGCT GAAGGTGCTC ACTCTTCTTC CTCTTCGGCT GGACATAAAA | 100 |
GAGGATGGCT TGGAATCGAT TCTGCTCCTA TTCCCTCATC ATTTGCTCGT | 150 |
GTAGACTCTT CACATAATCC GATCGAAGAA TCCATGAGCA AGGCATTTCC | 200 |
AGAGGAAGCA AGGGAGAAAA AAAGGAGGTA CAGAGGAGTA AGGCAGAGAC | 250 |
CATGGGGCAA ATGGGCAGCT GAGATACGTG ATCCACATAG AGCCGCTAGG | 300 |
GTTTGGCTCG GGACGTTTGA TACAGCGGAG GCCGCGGCTA GAGCCTACGA | 350 |
CGAGGCTGCA CTCCGGTTCC GTGGAAATAA AGCAAAGCTA AATTTCCCAG | 400 |
AGGATGTAAG GATTCTTCCT CCTCCCCCTC CTCTTCTTCG TTCACCAGCT | 450 |
GACACGGTGG CGAATAAAGC AGAAGAGGAT CTGATAAATT ATTGGAGTTA | 500 |
TACAAAGTTG TTGCAAAGTT CAGGCCAACG GTCATTTCTC GAGCGAGGAC | 550 |
AAGAAGAGAG TAGTAACATA TTTGAACATT CACCAATGGA ACAACCTCTG | 600 |
CCTCCTTCAA GTTCTGGTCC AAGTTCCTCT AATTTTCCTG CACCTTCTCT | 650 |
ACCTAATACA TAG | 700 |
>AT5G50080.1 longest ORF length:220
MSAMVSALTQ VVSARSQTEA EGAHSSSSSA GHKRGWLGID SAPIPSSFAR | 50 |
VDSSHNPIEE SMSKAFPEEA REKKRRYRGV RQRPWGKWAA EIRDPHRAAR | 100 |
VWLGTFDTAE AAARAYDEAA LRFRGNKAKL NFPEDVRILP PPPPLLRSPA | 150 |
DTVANKAEED LINYWSYTKL LQSSGQRSFL ERGQEESSNI FEHSPMEQPL | 200 |
PPSSSGPSSS NFPAPSLPNT | 250 |