Locus |
Common name |
Short description |
AT5G50470 |
NF-YC7 |
"nuclear factor Y, subunit C7", nuclear factor Y, subunit C7 (.1) |
>AT5G50470.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
379, 515 |
PstI
| CTGCA|G |
248 |
PvuII
| CAG|CTG |
602 |
StyI
| C|C[AT][AT]GG |
420 |
Click here to view TAIR data
>AT5G50470.1 length:639
ATGGAAGAGA ACAACGGCAA CAACAACCAC TACCTGCCGC AACCATCGTC | 50 |
TTCCCAACTG CCGCCGCCAC CATTGTATTA TCAATCAATG CCGTTGCCGT | 100 |
CATATTCACT GCCGCTGCCG TACTCACCGC AGATGCGGAA TTATTGGATT | 150 |
GCGCAGATGG GAAACGCAAC TGATGTTAAG CATCATGCGT TTCCACTAAC | 200 |
CAGGATAAAG AAAATCATGA AGTCCAACCC GGAAGTGAAC ATGGTCACTG | 250 |
CAGAGGCTCC GGTCCTTATA TCGAAGGCCT GTGAGATGCT CATTCTTGAT | 300 |
CTCACAATGC GATCGTGGCT TCATACCGTG GAGGGCGGTC GCCAAACTCT | 350 |
CAAGAGATCC GATACGCTCA CGAGATCCGA TATCTCCGCC GCAACGACTC | 400 |
GTAGTTTCAA ATTTACCTTC CTTGGCGACG TTGTCCCAAG AGACCCTTCC | 450 |
GTCGTTACCG ATGATCCCGT GCTACATCCG GACGGTGAAG TACTTCCTCC | 500 |
GGGAACGGTG ATAGGATATC CGGTGTTTGA TTGTAATGGT GTGTACGCGT | 550 |
CACCGCCACA GATGCAGGAG TGGCCGGCGG TGCCTGGTGA CGGAGAGGAG | 600 |
GCAGCTGGGG AAATTGGAGG AAGCAGCGGC GGTAATTGA | 650 |
>AT5G50470.1 longest ORF length:212
MEENNGNNNH YLPQPSSSQL PPPPLYYQSM PLPSYSLPLP YSPQMRNYWI | 50 |
AQMGNATDVK HHAFPLTRIK KIMKSNPEVN MVTAEAPVLI SKACEMLILD | 100 |
LTMRSWLHTV EGGRQTLKRS DTLTRSDISA ATTRSFKFTF LGDVVPRDPS | 150 |
VVTDDPVLHP DGEVLPPGTV IGYPVFDCNG VYASPPQMQE WPAVPGDGEE | 200 |
AAGEIGGSSG GN | 250 |
|