Locus |
Common name |
Short description |
AT5G50480 |
NF-YC6 |
"nuclear factor Y, subunit C6", nuclear factor Y, subunit C6 (.1) |
>AT5G50480.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
334 |
NheI
| G|CTAGC |
352 |
PvuII
| CAG|CTG |
73 |
Click here to view TAIR data
>AT5G50480.1 length:609
ATGGCTGAGA ACAACAACAA CAACGGCGAC AACATGAACA ACGACAACCA | 50 |
CCAGCAACCA CCGTCGTACT CGCAGCTGCC GCCGATGGCA TCATCCAACC | 100 |
CTCAGTTACG TAATTACTGG ATTGAGCAGA TGGAAACCGT CTCGGATTTC | 150 |
AAAAACCGTC AGCTTCCATT GGCTCGAATT AAGAAGATCA TGAAGGCTGA | 200 |
TCCAGATGTG CACATGGTCT CCGCAGAGGC TCCGATCATC TTCGCAAAGG | 250 |
CTTGCGAAAT GTTCATCGTT GATCTCACGA TGCGGTCGTG GCTCAAAGCC | 300 |
GAGGAGAACA AACGCCACAC GCTTCAGAAA TCGGATATCT CCAACGCAGT | 350 |
GGCTAGCTCT TTCACCTACG ATTTCCTTCT TGATGTTGTC CCTAAGGACG | 400 |
AGTCTATCGC CACCGCTGAT CCTGGCTTTG TGGCTATGCC ACATCCTGAC | 450 |
GGTGGAGGAG TACCGCAATA TTATTATCCA CCGGGAGTGG TGATGGGAAC | 500 |
TCCTATGGTT GGTAGTGGAA TGTACGCGCC ATCGCAGGCG TGGCCAGCAG | 550 |
CGGCTGGTGA CGGGGAGGAT GATGCTGAGG ATAATGGAGG AAACGGCGGC | 600 |
GGAAATTGA | 650 |
>AT5G50480.1 longest ORF length:202
MAENNNNNGD NMNNDNHQQP PSYSQLPPMA SSNPQLRNYW IEQMETVSDF | 50 |
KNRQLPLARI KKIMKADPDV HMVSAEAPII FAKACEMFIV DLTMRSWLKA | 100 |
EENKRHTLQK SDISNAVASS FTYDFLLDVV PKDESIATAD PGFVAMPHPD | 150 |
GGGVPQYYYP PGVVMGTPMV GSGMYAPSQA WPAAAGDGED DAEDNGGNGG | 200 |
GN | 250 |
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