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| Locus | Common name | Short description |
| AT5G50570 | SPL13, SPL13A | SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13, Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (.1), Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (.2) |
>AT5G50570.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TspRI, Tth111I, XbaI, XcmI, XmaI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 521, 672, 828, 1049 |
| AflIII | A|CPuPyGT | 606 |
| AluI | AG|CT | 20, 220, 242, 638, 704, 818 |
| AlwNI | CAGNNN|CTG | 1007 |
| ApoI | Pu|AATTPy | 9 |
| AseI | AT|TAAT | 400 |
| AvaI | C|PyCGPuG | 246, 636, 822 |
| BfaI | C|TAG | 584 |
| BsaWI | [AT]|CCGG[AT] | 1027 |
| BsiEI | CGPuPy|CG | 540 |
| BsiHKAI | G[AT]GC[AT]|C | 878 |
| BslI | CCNNNNN|NNGG | 72, 641 |
| BsmI | GAATGCN| | 994 |
| BsoBI | C|PyCGPuG | 246, 636, 822 |
| Bsp1286I | G[GAT]GC[CAT]|C | 878 |
| BsrI | ACTGGN| | 5 |
| BstF5I | GGATGNN| | 73, 314 |
| DdeI | C|TNAG | 18, 195 |
| DpnI | GA-CH3|TC | 44, 79, 125, 1014 |
| DpnII | |GATC | 44, 79, 125, 1014 |
| Fnu4HI | GC|NGC | 433, 521, 672 |
| HincII | GTPy|PuAC | 425 |
| HinfI | G|ANTC | 40, 318, 867 |
| HpaII | C|CGG | 1026 |
| Hpy188I | TCN|GA | 321, 870, 1008 |
| Hpy99I | CG[AT]CG| | 513, 904 |
| HpyCH4III | ACN|GT | 101, 769, 963 |
| HpyCH4IV | A|CGT | 487 |
| HpyCH4V | TG|CA | 431, 727, 804, 857, 1000 |
| MboI | |GATC | 44, 79, 125, 1014 |
| MseI | T|TAA | 399 |
| MslI | CAPyNN|NNPuTG | 837 |
| MspI | C|CGG | 1026 |
| MwoI | GCNNNNN|NNGC | 672 |
| NlaIII | CATG| | 443, 605, 863 |
| NlaIV | GGN|NCC | 280 |
| NspI | PuCATG|Py | 606 |
| PaeR7I | C|TCGAG | 246, 822 |
| PciI | A|CATGT | 606 |
| PflMI | CCANNNN|NTGG | 72 |
| RsaI | GT|AC | 771 |
| Sau3AI | |GATC | 44, 79, 125, 1014 |
| SfcI | C|TPuPyAG | 668 |
| SmlI | C|TPyPuAG | 246, 822 |
| Taqƒ¿I | T|CGA | 42, 77, 245, 505, 683, 821 |
| TfiI | G|A[AT]TC | 40, 318 |
| TliI | C|TCGAG | 246, 822 |
| TseI | G|C[AT]GC | 433, 524 |
| Tsp45I | |GT[CG]AC | 98 |
| Tsp509I | |AATT | 8, 332, 579, 792 |
| XhoI | C|TCGAG | 246, 822 |
| XmnI | GAANN|NNTTC | 156 |
Click here to view TAIR data
>AT5G50570.1 length:1080
ATGGACTGGA ATTTCAAACT TAGCTCTGGT TATTTATCTG GATTCGATCA | 50 |
AGAACCAGAT TTATCACCAA TGGATGGTTC GATCTCGTTT GGTGGGTCGT | 100 |
CACAGTCAAA AGCGGATTTT TCATTTGATC TAAAACTTGG AAGAAACATT | 150 |
GGAAACTCTT CCTCTGTTTT TGGTGATACA GAGCAAGTGA TTAGTCTTAG | 200 |
TAAGTGGAAA GATAGTGCTT TAGCTAAACC AGAAGGTTCA AGAAGCTCGA | 250 |
GTTCAAAGAG AACAAGAGGG AATGGTGTTG GAACCAACCA GATGCCGATT | 300 |
TGTCTTGTTG ATGGATGTGA TTCTGATTTT AGTAATTGTA GAGAGTATCA | 350 |
TAAGAGACAT AAAGTTTGTG ATGTTCATTC AAAAACTCCT GTGGTTACTA | 400 |
TTAATGGTCA TAAACAGAGG TTTTGTCAAC AATGCAGCAG GTTTCATGCT | 450 |
TTGGAGGAGT TTGATGAAGG GAAGAGAAGT TGTAGGAAAC GTCTTGATGG | 500 |
ACATAATCGA AGACGACGGA AGCCGCAGCC TGAACATATC GGTCGTCCTG | 550 |
CCAACTTCTT TACGGGTTTT CAAGGTAGCA AATTGCTAGA GTTTTCTGGT | 600 |
GGTTCACATG TGTTTCCAAC TACATCTGTG TTGAACCCGA GCTGGGGAAA | 650 |
TAGTCTTGTA AGCGTTGCTG TAGCCGCCAA TGGTTCGAGT TATGGGCAGA | 700 |
GCCAGAGCTA TGTTGTTGGT TCTTCTCCTG CAAAGACAGG GATAATGTTT | 750 |
CCAATCTCTT CTTCTCCAAA CAGTACCAGA AGCATAGCAA AACAATTCCC | 800 |
TTTCTTGCAA GAAGAAGAAA GCTCGAGAAC CGCATCGTTG TGTGAGAGAA | 850 |
TGACGAGTTG CATCCATGAC TCTGATTGTG CTCTCTCTCT TCTGTCATCC | 900 |
TCCTCGTCGT CAGTCCCTCA TTTGCTTCAA CCACCACTTT CTTTGTCCCA | 950 |
AGAAGCAGTT GAGACAGTTT TTTACGGGTC GGGATTGTTT GAGAATGCGA | 1000 |
GTGCAGTCTC TGATGGATCG GTTATATCCG GTAACGAGGC TGTCCGTCTT | 1050 |
CCGCAGACAT TCCCGTTTCA TTGGGAGTAG | 1100 |
>AT5G50570.1 longest ORF length:359
MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI | 50 |
GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI | 100 |
CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA | 150 |
LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG | 200 |
GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF | 250 |
PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS | 300 |
SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL | 350 |
PQTFPFHWE | 400 |