Locus |
Common name |
Short description |
AT5G50820 |
ANAC097 |
NAC domain containing protein 97 (.1) |
>AT5G50820.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
84 |
NcoI
| C|CATGG |
172, 388 |
SacI
| GAGCT|C |
148 |
SmaI
| CCC|GGG |
55 |
StyI
| C|C[AT][AT]GG |
172, 388 |
XbaI
| T|CTAGA |
421 |
XhoI
| C|TCGAG |
371 |
Click here to view TAIR data
>AT5G50820.1 length:582
ATGGACATTT CTGCGCAGAG ATTTGCCATG AACGGAAGAA GCATGAGACT | 50 |
CCCTCCCGGG TTTCGGTTCG ATCCCGATGA TGAAGATCTT GTGTTCGAGT | 100 |
ATCTCGCCAA GAAGGTCCTC CACCGTCCAA TGGACTTCGA TCTCCCTGAG | 150 |
CTCCGTTCTT GCAATGTTGA TCCATGGGAC TTGCTAGGAG AGAAGAACAA | 200 |
GGAAGTGTAT TACTTCGTGA AGAAGGAAGA GCGAGAGAGG AAGGGAAGAG | 250 |
AGACGTTATC CGGTTATTGG GAAGAGTGTG AAGAAGAGGA AGTAATGGAG | 300 |
GCTGGTGGTC GTGATTGTAT TCATTTAGAA GGAAGGAGAA AGACATTTGC | 350 |
TTTCTTTATT GGAAAAAAAC CTCGAGGGAC AATAACTCCA TGGATCATGT | 400 |
ACGAGTTCCG ACTTCTTTCC TCTAGAGCTA CAAGGTGGTC ATCGTCCCCT | 450 |
CTACCTCGGG GTGAGGTAGG AAAATGGAGG GCGGTGAAAG TCGTAGTGAA | 500 |
GGAAGAGAAT GATGAAGAGA TGGTGGAGGA TGAGCACGAG TCTGACGAGT | 550 |
CTGATGGCGA GGAAGTTATT CAAAGCCGGT GA | 600 |
>AT5G50820.1 longest ORF length:193
MDISAQRFAM NGRSMRLPPG FRFDPDDEDL VFEYLAKKVL HRPMDFDLPE | 50 |
LRSCNVDPWD LLGEKNKEVY YFVKKEERER KGRETLSGYW EECEEEEVME | 100 |
AGGRDCIHLE GRRKTFAFFI GKKPRGTITP WIMYEFRLLS SRATRWSSSP | 150 |
LPRGEVGKWR AVKVVVKEEN DEEMVEDEHE SDESDGEEVI QSR | 200 |
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