fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus	Common name	Short description
AT5G50915	bHLH137	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT5G50915.2 CDS map

>>Show genomic map

Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI

Name	Recognition sequence	Cut positions
SpeI	A\|CTAGT	88
StyI	C\|C[AT][AT]GG	326

Click here to view TAIR data

>AT5G50915.2 length:861

ATGGCAACTT TCTCTTATTT CCAAAACTAC CCTCATTCCC TTCTTGATCC	50
TCTTCTCTTC CCTACACCTC ACTCCTCCAT TAATCTCACT AGTTTCATCG	100
ATCAAAACCA TCTCTATCCA CTACCAAACA TTTCCACAGT TGAAGACATT	150
TCCTTTCTTG AATATAATGT TGACAAAACT GAAAACTCTG GTTCAGAGAA	200
ACTGGCCAAC ACAACCAAAA CAGCAACCAC CGGTTCTTCT TCCTGCGACC	250
AGCTCAGCCA CGGACCATCA GCCATCACCA ACACCGGAAA AACCCGTGGG	300
AGGAAGGCCA GAAACAGTAA TAACTCCAAG GAAGGAGTAG AGGGAAGAAA	350
AAGCAAAAAA CAGAAGAGAG GAAGCAAAGA AGAGCCTCCA ACAGATTACA	400
TTCACGTTCG AGCTAGAAGA GGCCAAGCTA CTGATAGCCA CAGCCTTGCT	450
GAGAGGGTGA GAAGGGAAAA GATAAGTGAG CGGATGAGGA CTCTGCAAAA	500
CCTTGTTCCG GGCTGTGATA AGGTAACAGG GAAGGCCCTC ATGTTGGATG	550
AGATTATAAA TTATGTCCAG ACCTTGCAGA CTCAAGTTGA GTTTCTCTCA	600
ATGAAGCTAA CTTCTATAAG TCCGGTGGTC TATGACTTTG GCTCCGACCT	650
TGATGGCCTC ATACTTCAAT CTGAGATGGG TTCTCCAGAA GTAGGAACGT	700
CTTTTACCAA TGCAATGCCA ACAACTACTC CTATCTTTCC TTCACTATTG	750
GATAATTCTG TAGTTCCCAC ACATGCACAA GTTCAGGAAG AGGGAGAAGA	800
AAGAGAGAAC TTTGTAGACA GAAGTGGGTT CAACAACAAC AACTTCTGTT	850
CTTTCCCTTG A	900

>AT5G50915.2 longest ORF length:286

MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI	50
SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG	100
RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA	150
ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS	200
MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL	250
DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP	300