Locus |
Common name |
Short description |
AT5G51190 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT5G51190.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
48 |
NcoI
| C|CATGG |
235, 314 |
PvuII
| CAG|CTG |
481 |
StyI
| C|C[AT][AT]GG |
235, 314 |
Click here to view TAIR data
>AT5G51190.1 length:666
ATGGCTTCTT CACATCAACA ACAGCAAGAA CAAGACCAGT CAGCTTTAGA | 50 |
TCTCATAACC CAACACCTTC TTACTGATTT CCCTTCCTTA GACACCTTTG | 100 |
CCTCCACCAT CCACCACTGC ACCACCTCAA CTCTAAGCCA ACGCAAACCA | 150 |
CCTCTTGCCA CTATAGCAGT TCCTACTACT GCACCGGTGG TTCAAGAGAA | 200 |
TGATCAAAGG CATTACAGAG GCGTCAGGAG AAGACCATGG GGTAAGTATG | 250 |
CGGCTGAGAT CAGAGACCCA AACAAGAAAG GTGTTCGTGT CTGGTTAGGC | 300 |
ACTTTTGACA CAGCCATGGA AGCTGCAAGA GGTTATGACA AGGCAGCTTT | 350 |
TAAACTACGA GGAAGCAAAG CTATTCTTAA CTTCCCACTT GAAGCAGGAA | 400 |
AGCATGAGGA CTTGGGAGAC AACAAGAAGA CTATTTCTTT AAAAGCAAAG | 450 |
AGGAAGAGAC AGGTGACGGA GGATGAAAGC CAGCTGATCA GCCGTAAAGC | 500 |
TGTTAAGAGG GAAGAAGCTC AGGTTCAGGC TGATGCTTGT CCATTAACGC | 550 |
CATCAAGTTG GAAGGGGTTT TGGGACGGAG CAGACAGTAA AGACATGGGA | 600 |
ATATTTTCCG TGCCTCTGTT ATCTCCTTGT CCATCTCTTG GACACTCTCA | 650 |
ACTCGTAGTT ACTTAA | 700 |
>AT5G51190.1 longest ORF length:221
MASSHQQQQE QDQSALDLIT QHLLTDFPSL DTFASTIHHC TTSTLSQRKP | 50 |
PLATIAVPTT APVVQENDQR HYRGVRRRPW GKYAAEIRDP NKKGVRVWLG | 100 |
TFDTAMEAAR GYDKAAFKLR GSKAILNFPL EAGKHEDLGD NKKTISLKAK | 150 |
RKRQVTEDES QLISRKAVKR EEAQVQADAC PLTPSSWKGF WDGADSKDMG | 200 |
IFSVPLLSPC PSLGHSQLVV T | 250 |
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