fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G51230 AtEMF2, CYR1, VEF2, EMF2 CYTOKININ RESISTANT 1, EMBRYONIC FLOWER 2, VEFS-Box of polycomb protein (.1.2.3)

>AT5G51230.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 1386
EcoRV GAT|ATC 1019, 1116
NcoI C|CATGG 1529, 1714
PstI CTGCA|G 362, 803, 1364
SacI GAGCT|C 771, 1200, 1520
StyI C|C[AT][AT]GG 1121, 1529, 1714
XbaI T|CTAGA 1536
XhoI C|TCGAG 768


Click here to view TAIR data

>AT5G51230.2 length:1881
ATGCCAGGCA TTCCTCTTGT TAGTCGTGAA ACCTCTTCTT GTTCAAGAAG 
50
CACAGAGCAG ATGTGCCATG AAGACTCCCG TCTGCGTATT TCGGAAGAGG 
100
AGGAGATTGC TGCTGAAGAG AGCTTGGCTG CCTATTGCAA GCCTGTTGAA 
150
CTCTACAATA TCATTCAACG CCGTGCTATT AGGAATCCCT TGTTTCTTCA 
200
GCGATGTTTG CATTATAAGA TTGAGGCAAA ACATAAAAGG AGAATACAAA 
250
TGACTGTATT CCTCTCGGGC GCTATAGATG CTGGGGTACA AACTCAAAAA 
300
TTATTCCCTC TGTATATTTT GTTGGCAAGA CTCGTTTCTC CTAAGCCTGT 
350
CGCTGAGTAT TCTGCAGTAT ATAGGTTCAG TCGAGCATGT ATCCTAACTG 
400
GTGGATTGGG GGTTGATGGA GTTAGTCAAG CCCAAGCCAA CTTTCTTCTC 
450
CCTGATATGA ATAGACTCGC ATTGGAGGCA AAATCAGGAT CACTCGCTAT 
500
CTTGTTTATC AGCTTTGCTG GTGCGCAAAA TTCTCAATTT GGCATTGATT 
550
CAGGCAAGAT TCATTCAGGA AATATAGGAG GACATTGTTT ATGGAGCAAA 
600
ATACCTCTGC AATCACTGTA TGCGTCGTGG CAGAAATCAC CAAACATGGA 
650
CTTGGGACAG AGAGTAGACA CAGTCTCTCT TGTTGAAATG CAGCCTTGCT 
700
TCATAAAGCT AAAGTCCATG AGTGAGGAAA AGTGTGTCTC GATTCAGGTG 
750
CCCAGCAATC CACTCACCTC GAGCTCTCCG CAGCAAGTGC AAGTCACCAT 
800
ATCTGCAGAA GAAGTTGGGT CAACGGAAAA ATCTCCTTAT AGTTCATTTT 
850
CATATAATGA CATCTCTTCC TCTTCCTTGT TGCAAATTAT CAGGTTGAGA 
900
ACAGGAAATG TAGTTTTCAA CTACAGATAC TATAACAACA AATTGCAGAA 
950
GACTGAAGTA ACTGAAGACT TTTCTTGTCC ATTCTGCTTA GTAAAATGTG 
1000
CCAGTTTCAA GGGCCTGAGA TATCACTTGC CATCAACCCA CGATCTCCTC 
1050
AATTTCGAGT TTTGGGTAAC TGAAGAATTT CAGGCGGTAA ATGTCTCCCT 
1100
CAAGACTGAG ACAATGATAT CCAAGGTTAA TGAGGATGAC GTTGACCCAA 
1150
AGCAGCAAAC TTTCTTTTTT TCACGGAGGA GGCAAAAGAG TCAGGTACGG 
1200
AGCTCAAGGC AAGGGCCTCA TCTTGGATTA GGTTGCGAGG TGCTAGATAA 
1250
GACTGATGAT GCTCATTCTG TTAGAAGTGA GAAGAGCCGA ATACCACCTG 
1300
GAAAGCATTA CGAAAGAATT GGGGGTGCTG AGTCTGGTCA AAGAGTTCCT 
1350
CCTGGCACGA GTCCTGCAGA CGTGCAATCA TGTGGGGATC CAGATTATGT 
1400
GCAGTCGATA GCTGGAAGTA CAATGTTGCA GTTTGCAAAA ACGAGGAAAA 
1450
TATCTATAGA ACGGTCGGAC TTGAGGAACC GAAGCCTCCT TCAGAAGAGA 
1500
CAGTTCTTCC ACTCTCATCG AGCTCAGCCC ATGGCTCTAG AACAAGTACT 
1550
TTCGGACCGG GATAGTGAAG ATGAAGTTGA TGATGATGTG GCAGATTTTG 
1600
AAGATAGAAG GATGCTCGAT GATTTCGTTG ATGTGACTAA AGATGAGAAA 
1650
CAGATGATGC ACATGTGGAA CTCGTTTGTG AGGAAGCAGC GAGTATTAGC 
1700
AGATGGTCAC ATTCCATGGG CATGCGAGGC ATTCTCAAGA TTGCACGGAC 
1750
CCATCATGGT TCGAACACCG CACTTGATTT GGTGCTGGAG AGTGTTTATG 
1800
GTGAAACTGT GGAACCACGG TCTTCTTGAT GCCCGAACCA TGAACAACTG 
1850
TAATACCTTT CTCGAACAGC TCCAAATTTG A
1900

>AT5G51230.2 longest ORF length:626
MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE 
50
LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK 
100
LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL 
150
PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK 
200
IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV 
250
PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR 
300
TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL 
350
NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SRRRQKSQVR 
400
SSRQGPHLGL GCEVLDKTDD AHSVRSEKSR IPPGKHYERI GGAESGQRVP 
450
PGTSPADVQS CGDPDYVQSI AGSTMLQFAK TRKISIERSD LRNRSLLQKR 
500
QFFHSHRAQP MALEQVLSDR DSEDEVDDDV ADFEDRRMLD DFVDVTKDEK 
550
QMMHMWNSFV RKQRVLADGH IPWACEAFSR LHGPIMVRTP HLIWCWRVFM 
600
VKLWNHGLLD ARTMNNCNTF LEQLQI
650