fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G51780 bHLH036 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G51780.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
XbaI T|CTAGA 211


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>AT5G51780.1 length:525
ATGGAGAAGA TGATGCACAG AGAAACTGAG AGGCAAAGGA GACAAGAAAT 
50
GGCTTCTCTT TATGCCTCTC TTCGTTCTCT TCTCCCTCTT CACTTCATCA 
100
AGGGTAAGCG TTCGACGTCA GATCAAGTCA ACGAGGCGGT GAACTACATA 
150
AAGTATCTAC AGAGGAAGAT CAAGGAGCTA AGTGTGAGGA GAGATGATCT 
200
CATGGTACTG TCTAGAGGAA GTTTATTGGG TAGTAGTAAT GGTGATTTTA 
250
AGGAAGATGT GGAGATGATA AGTGGGAAAA ATCATGTGGT GGTTCGTCAG 
300
TGTTTGGTTG GTGTGGAAAT CATGTTGAGT AGCCGCTGCT GCGGTGGCCA 
350
ACCGCGGTTT TCGAGTGTTC TTCAAGTGCT TAGTGAATAT GGTCTCTGCC 
400
TTCTTAACTC CATCTCCTCT ATTGTTGATG ATAGGCTAGT TTACACCATA 
450
CAGGCCGAGG TCAACGATAT GGCTTTGATG ATTGACTTAG CAGAACTTGA 
500
AAAGAGATTA ATCAGAATGA AGTAA
550

>AT5G51780.1 longest ORF length:174
MEKMMHRETE RQRRQEMASL YASLRSLLPL HFIKGKRSTS DQVNEAVNYI 
50
KYLQRKIKEL SVRRDDLMVL SRGSLLGSSN GDFKEDVEMI SGKNHVVVRQ 
100
CLVGVEIMLS SRCCGGQPRF SSVLQVLSEY GLCLLNSISS IVDDRLVYTI 
150
QAEVNDMALM IDLAELEKRL IRMK
200