fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G51790 bHLH120 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G51790.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 325, 331
BglII A|GATCT 264
HindIII A|AGCTT 82
NdeI CA|TATG 43
SpeI A|CTAGT 313
XhoI C|TCGAG 430


Click here to view TAIR data

>AT5G51790.1 length:630
ATGAATCCTT CTAACAATCC TAAAAAGACA AGGCACCAGA GTCATATGCC 
50
TCAAGAAAGA GATGAAACGA AGAAGGAGAA GAAGCTTCTC CACCGCAACA 
100
TCGAACGACA AAGAAGACAA GAAATGGCGA TCCTTTTCGC CTCTCTTCGT 
150
AGTCAGCTAC CTCTAAAATA CATCAAGGCT CTTTCTTCGC AGGGAAAGAG 
200
AGCCATGTCA GATCATGTAA ACGGAGCAGT AAGTTTCATC AAAGACACGC 
250
AAACAAGGAT AAAAGATCTC TCCGCAAGAA GAGACGAGCT AAAGCGAGAG 
300
ATTGGTGACC CTACTAGTCT AACTGGATCC GGATCCGGAT CTGGATCAAG 
350
TAGATCGGAA CCAGCTAGTG TCATGGTGCA ACCGTGTGTG AGCGGCTTCG 
400
AGGTGGTTGT GAGCAGCTTA GCATCAGGTC TCGAGGCTTG GCCACTCTCA 
450
AGAGTTCTTG AAGTTCTTCA CGGGCAAGGA CTTGAAGTCA TCAGCTCTTT 
500
AACAGCACGA GTCAACGAGA GGCTCATGTA CACTATACAA GTCGAGGTAA 
550
ATAGCTTTGA TTGCTTCGAC TTAGCTTGGT TGCAGCAGAA GCTAATTGAG 
600
CAGTTAGTAC TTTCCACGAC TAGGCACTGA 
650

>AT5G51790.1 longest ORF length:209
MNPSNNPKKT RHQSHMPQER DETKKEKKLL HRNIERQRRQ EMAILFASLR 
50
SQLPLKYIKA LSSQGKRAMS DHVNGAVSFI KDTQTRIKDL SARRDELKRE 
100
IGDPTSLTGS GSGSGSSRSE PASVMVQPCV SGFEVVVSSL ASGLEAWPLS 
150
RVLEVLHGQG LEVISSLTAR VNERLMYTIQ VEVNSFDCFD LAWLQQKLIE 
200
QLVLSTTRH
250