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| Locus | Common name | Short description |
| AT5G51990 | CBF4, DREB1D | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D, C-repeat-binding factor 4 (.1) |
>AT5G51990.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, BtgI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeIII, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Taqƒ¿I, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 596 |
| AflIII | A|CPuPyGT | 145, 647 |
| AhdI | GACNNN|NNGTC | 365 |
| AluI | AG|CT | 94, 118, 292, 385, 397 |
| ApoI | Pu|AATTPy | 180 |
| BfaI | C|TAG | 225 |
| BglII | A|GATCT | 55 |
| BsaWI | [AT]|CCGG[AT] | 60 |
| BsiHKAI | G[AT]GC[AT]|C | 272 |
| BslI | CCNNNNN|NNGG | 609 |
| Bsp1286I | G[GAT]GC[CAT]|C | 272 |
| BspHI | T|CATGA | 276 |
| BsrDI | GCAATGNN| | 405 |
| BssSI | C|TCGTG | 269 |
| BstF5I | GGATGNN| | 535, 555, 588 |
| BstYI | Pu|GATCPy | 55, 436 |
| Bsu36I | CC|TNAGG | 371 |
| BtrI | CAC|GTC | 146 |
| DdeI | C|TNAG | 355, 370 |
| DpnI | GA-CH3|TC | 47, 54, 435 |
| DpnII | |GATC | 47, 54, 435 |
| EcoRI | G|AATTC | 180 |
| Fnu4HI | GC|NGC | 264, 285, 341, 387, 399, 447, 465, 596 |
| HaeII | PuGCGC|Py | 543 |
| HhaI | GCG|C | 542 |
| HinP1I | G|CGC | 542 |
| HinfI | G|ANTC | 2, 27, 330, 377, 617 |
| HpaII | C|CGG | 59, 602 |
| Hpy188I | TCN|GA | 45, 66, 152, 173, 248, 380, 393, 413 |
| Hpy99I | CG[AT]CG| | 250, 427 |
| HpyCH4III | ACN|GT | 70, 252 |
| HpyCH4IV | A|CGT | 145, 645 |
| HpyCH4V | TG|CA | 400 |
| MboI | |GATC | 47, 54, 435 |
| MspI | C|CGG | 59, 602 |
| MwoI | GCNNNNN|NNGC | 270, 291, 333, 396, 453, 596 |
| NlaIII | CATG| | 275 |
| RsaI | GT|AC | 240 |
| Sau3AI | |GATC | 47, 54, 435 |
| TfiI | G|A[AT]TC | 2, 330, 377, 617 |
| TseI | G|C[AT]GC | 264, 285, 387, 399 |
| Tsp45I | |GT[CG]AC | 643, 650 |
| Tsp509I | |AATT | 179, 320 |
Click here to view TAIR data
>AT5G51990.1 length:675
ATGAATCCAT TTTACTCTAC ATTCCCAGAC TCGTTTCTCT CAATCTCCGA | 50 |
TCATAGATCT CCGGTTTCAG ACAGTAGTGA GTGTTCACCA AAGTTAGCTT | 100 |
CAAGTTGTCC AAAGAAACGA GCTGGGAGGA AGAAGTTTCG TGAGACACGT | 150 |
CATCCGATTT ACAGAGGAGT TCGTCAGAGG AATTCTGGTA AATGGGTTTG | 200 |
TGAAGTTAGA GAGCCTAATA AGAAATCTAG GATTTGGTTA GGTACTTTTC | 250 |
CGACGGTTGA AATGGCTGCT CGTGCTCATG ATGTTGCTGC TTTAGCTCTT | 300 |
CGTGGTCGCT CTGCTTGTCT CAATTTCGCT GATTCTGCTT GGCGGCTTCG | 350 |
TATTCCTGAG ACTACTTGTC CTAAGGAGAT TCAGAAAGCT GCGTCTGAAG | 400 |
CTGCAATGGC GTTTCAGAAT GAGACTACGA CGGAGGGATC TAAAACTGCG | 450 |
GCGGAGGCAG AGGAGGCGGC AGGGGAGGGG GTGAGGGAGG GGGAGAGGAG | 500 |
GGCGGAGGAG CAGAATGGTG GTGTGTTTTA TATGGATGAT GAGGCGCTTT | 550 |
TGGGGATGCC CAACTTTTTT GAGAATATGG CGGAGGGGAT GCTTTTGCCG | 600 |
CCGCCGGAAG TTGGCTGGAA TCATAACGAC TTTGACGGAG TGGGTGACGT | 650 |
GTCACTCTGG AGTTTTGACG AGTAA | 700 |
>AT5G51990.1 longest ORF length:224
MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR | 50 |
HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL | 100 |
RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA | 150 |
AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP | 200 |
PPEVGWNHND FDGVGDVSLW SFDE | 250 |