fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G51990 CBF4, DREB1D DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D, C-repeat-binding factor 4 (.1)

>AT5G51990.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 55
EcoRI G|AATTC 180


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>AT5G51990.1 length:675
ATGAATCCAT TTTACTCTAC ATTCCCAGAC TCGTTTCTCT CAATCTCCGA 
50
TCATAGATCT CCGGTTTCAG ACAGTAGTGA GTGTTCACCA AAGTTAGCTT 
100
CAAGTTGTCC AAAGAAACGA GCTGGGAGGA AGAAGTTTCG TGAGACACGT 
150
CATCCGATTT ACAGAGGAGT TCGTCAGAGG AATTCTGGTA AATGGGTTTG 
200
TGAAGTTAGA GAGCCTAATA AGAAATCTAG GATTTGGTTA GGTACTTTTC 
250
CGACGGTTGA AATGGCTGCT CGTGCTCATG ATGTTGCTGC TTTAGCTCTT 
300
CGTGGTCGCT CTGCTTGTCT CAATTTCGCT GATTCTGCTT GGCGGCTTCG 
350
TATTCCTGAG ACTACTTGTC CTAAGGAGAT TCAGAAAGCT GCGTCTGAAG 
400
CTGCAATGGC GTTTCAGAAT GAGACTACGA CGGAGGGATC TAAAACTGCG 
450
GCGGAGGCAG AGGAGGCGGC AGGGGAGGGG GTGAGGGAGG GGGAGAGGAG 
500
GGCGGAGGAG CAGAATGGTG GTGTGTTTTA TATGGATGAT GAGGCGCTTT 
550
TGGGGATGCC CAACTTTTTT GAGAATATGG CGGAGGGGAT GCTTTTGCCG 
600
CCGCCGGAAG TTGGCTGGAA TCATAACGAC TTTGACGGAG TGGGTGACGT 
650
GTCACTCTGG AGTTTTGACG AGTAA
700

>AT5G51990.1 longest ORF length:224
MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR 
50
HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL 
100
RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA 
150
AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP 
200
PPEVGWNHND FDGVGDVSLW SFDE
250