Locus |
Common name |
Short description |
AT5G51990 |
CBF4, DREB1D |
DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D, C-repeat-binding factor 4 (.1) |
>AT5G51990.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
55 |
EcoRI
| G|AATTC |
180 |
Click here to view TAIR data
>AT5G51990.1 length:675
ATGAATCCAT TTTACTCTAC ATTCCCAGAC TCGTTTCTCT CAATCTCCGA | 50 |
TCATAGATCT CCGGTTTCAG ACAGTAGTGA GTGTTCACCA AAGTTAGCTT | 100 |
CAAGTTGTCC AAAGAAACGA GCTGGGAGGA AGAAGTTTCG TGAGACACGT | 150 |
CATCCGATTT ACAGAGGAGT TCGTCAGAGG AATTCTGGTA AATGGGTTTG | 200 |
TGAAGTTAGA GAGCCTAATA AGAAATCTAG GATTTGGTTA GGTACTTTTC | 250 |
CGACGGTTGA AATGGCTGCT CGTGCTCATG ATGTTGCTGC TTTAGCTCTT | 300 |
CGTGGTCGCT CTGCTTGTCT CAATTTCGCT GATTCTGCTT GGCGGCTTCG | 350 |
TATTCCTGAG ACTACTTGTC CTAAGGAGAT TCAGAAAGCT GCGTCTGAAG | 400 |
CTGCAATGGC GTTTCAGAAT GAGACTACGA CGGAGGGATC TAAAACTGCG | 450 |
GCGGAGGCAG AGGAGGCGGC AGGGGAGGGG GTGAGGGAGG GGGAGAGGAG | 500 |
GGCGGAGGAG CAGAATGGTG GTGTGTTTTA TATGGATGAT GAGGCGCTTT | 550 |
TGGGGATGCC CAACTTTTTT GAGAATATGG CGGAGGGGAT GCTTTTGCCG | 600 |
CCGCCGGAAG TTGGCTGGAA TCATAACGAC TTTGACGGAG TGGGTGACGT | 650 |
GTCACTCTGG AGTTTTGACG AGTAA | 700 |
>AT5G51990.1 longest ORF length:224
MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR | 50 |
HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL | 100 |
RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA | 150 |
AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP | 200 |
PPEVGWNHND FDGVGDVSLW SFDE | 250 |
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