fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G52260 ATMYB19 myb domain protein 19 (.1)

>AT5G52260.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 156
StyI C|C[AT][AT]GG 251


Click here to view TAIR data

>AT5G52260.1 length:807
ATGACCAAAT CTGGAGAGAG ACCAAAACAG AGACAGAGGA AAGGGTTATG 
50
GTCACCTGAA GAAGACCAGA AGCTCAAGAG TTTCATCCTC TCTCGTGGCC 
100
ATGCTTGCTG GACCACTGTT CCCATCCTAG CTGGATTGCA AAGGAATGGG 
150
AAAAGCTGCA GATTAAGGTG GATTAATTAC CTAAGACCAG GACTAAAGAG 
200
GGGGTCGTTT AGTGAAGAAG AAGAAGAGAC CATCTTGACT TTACATTCTT 
250
CCTTGGGTAA CAAGTGGTCT CGGATTGCAA AATATTTACC GGGAAGAACA 
300
GACAACGAGA TTAAGAACTA TTGGCATTCC TATCTGAAGA AGAGATGGCT 
350
CAAATCTCAA CCACAACTCA AAAGCCAAAT ATCAGACCTC ACAGAATCTC 
400
CTTCTTCACT ACTTTCTTGC GGGAAAAGAA ATCTGGAAAC CGAAACCCTA 
450
GATCACGTGA TCTCCTTCCA GAAATTTTCA GAGAATCCAA CTTCATCACC 
500
ATCCAAAGAA AGCAACAACA ACATGATCAT GAACAACAGT AATAACTTGC 
550
CTAAACTGTT CTTCTCTGAG TGGATCAGTT CTTCAAATCC ACACATCGAT 
600
TACTCCTCTG CTTTTACAGA TTCCAAGCAC ATTAATGAAA CTCAAGATCA 
650
AATCAATGAA GAGGAAGTGA TGATGATCAA TAACAACAAC TACTCTTCAC 
700
TTGAGGATGT CATGCTCCGT ACAGATTTTT TGCAGCCTGA TCATGAATAT 
750
GCAAATTATT ATTCTTCTGG AGATTTCTTC ATCAACAGTG ACCAAAATTA 
800
TGTCTAA
850

>AT5G52260.1 longest ORF length:268
MTKSGERPKQ RQRKGLWSPE EDQKLKSFIL SRGHACWTTV PILAGLQRNG 
50
KSCRLRWINY LRPGLKRGSF SEEEEETILT LHSSLGNKWS RIAKYLPGRT 
100
DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL 
150
DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID 
200
YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY 
250
ANYYSSGDFF INSDQNYV
300